Basic Information

Insect: Syrphus vitripennis
Gene Symbol: ttk
Assembly: GCA_958431115.1
Location: OY288110.1:18828877-18838620[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 4.2e-18 3.3e-15 56.6 0.0 2 45 594 638 593 638 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	4.2e-18	3.3e-15	56.6	0.0	2	45	594	638	593	638	0.96

Sequence Information

Coding Sequence: ATGTCCGTGCAGCAATTCTGCTTGCGGTGGAACAATCACCAACCGAATTTTATTTCGGTGTGTTCCTCGCTGCTGCATAATGGGACCTTGGTGGATGTAACCCTAGCGGCTGAAGGACGTCAGTTACAGGCGCACAAAATTGTCTTGTCCGCATGCAGCTCGTACTTCCAGACTCTTTTTACAACGAATCCATGTCAACATCCAATTGTCATATTGAAGGACGTCCAATACGACGATCTCAAGACAATGGTAGATTTTATGTACTACGGTGAGGTGAATGTGTCACAAGAACAATTACCGCACATTCTTAAAACGGCTGAGATGCTTAAAATCAAAGGCTTAGCCGAGATGCCCACCGATGCGGCGACTCTTACAAAGTCCGATAGTAAATCGTCGTCCGACCAGCCGGAACAACTGCAGAGCAGTGGGACCGATTCCTTGTGGGGTAGTTCAGAGTCACAATTTCAACAGCAACAACCGCAACCacatcaccaccaccaccatcatcagcaGAGTCAAACGCAGCAAATACATCAGCTAAGGAGATCACCTTCACCGCTTGGCCCTGGCACCTCACCAGCCACACGAAGGAAACGACTAAGAAAGTCTTCGAATAATGgtTCCGGTGATCGAATTACGGAAGATCATAGTGGAGTCGATACCGGAGGTAATATTAACCTATCCCAAATGGGTCAGATGTCATTTAGTGGGAATTCAAGTGGTCTAGGGCATActttacatacaaaaattataaaggaGTCAGCAAGTGTTGATGTTGATAGTCATCAGCAAGATTCTTCCCCCGATAGCTTAGACGATGGTAACGGTCATCCTCATACTATGCAAATCaaaCCCGAAACGGATTTGAGTGTTCCACAGACCCTACCCTTGGATATTTCTGGAGGCACTACTCCTTCAGAGCATGATGGTCCAAATGCCAGTTGCTCACAATCATCGCATTCAGGTCTGCAATGGACGGTCGTTGATTCAAATTATTCCCGATTTTCGCTGTCGTCTTGTCAGCCCAATTTAATTGGTAATGGCAACACAAACAATCCAAACGGAGGATTGAGTAATCAATCaaccaccaccaacaacaacaacaataacaacaacaacccgAGCAATACTGGAAACCAAAATACAACGGaccatcagcagcagcaacaacaacaacagcagcaacaacaacaacaacaacagcaacaacaacagcaacaacaacaacagcaacaacaacaacagcagcaacaacaacaacagcatcgACAACAGCAGCAAAACACCAACAATTCAAATGGCAACAATTCCAGTGCACCTAGCGGACTCAGCCACACCCAACAACAGCCGCAGCATGGTCACATTCAAATGCACTATACAAACTCCTCGTATTCGCCACAAATCATTTCCGTCAATAGTCTGGTGGGAAGCTACTCGCAGAATCTATCGACGCCAACGTCGCCAAATGAGTCGGCAATGGTGCAATCGGTGTACAGTCAGGGACCGACACCAACCCAATCGCCAGTCCATCAGATGAACACAGTTCCTTCGGGATTGACGACGACAAGTGCCGCTAGTAACGCCGGCTCTGGTAGTGGTGCGGGTAATAGTGCCAATGGCAATAACACTGGTAGTAGTGGATCGCTGACTACAACTGTGGTAAACACAGCTGGTAACAGTGGAACAGGTGTAGTCAACAATAGCCAAGTCCAGTCGGGCAACCAAACCACACAAACAGCTATAGTTGTTAAGCGAAAGCGCTCTGTAAATCCCCAAGGTGACGAGAACTTTATTCGGGCCCTCGAAGCGGTGCGATCAGGTGGCATTGGCTTTTGCAAAGCCGCCCGTCTCTACGGTGTTAATAACAGAACATTATGGTTAGAGTACAAGAAGCGAGGGTATCCCATCAGTCGTCCGAGCATAAAAAGTCGGGTAGTCAAACAGGAGAATCTGTCGCCTTCGCCGACACCCACCAACGAGGAAACAACGATCGAAAATTACGAACACATTAACCAGTCAGCTATTAACATGCAAGTTCCTCCCACATCGGATACTCCCACGCCACTCATGTGCACCCCGCACACTCATCCAATGGGCGTTATGGGCTTCCTCGACACGCGGCATATGGACTTCCCGACCAGTATACACACAATGTCACGACAGCGCTACGTCGATAGCGGTGTAAATGTTAATCCTTCTGCAATGAATCTGCAAAGTattaactttaattccatttag
Protein Sequence: MSVQQFCLRWNNHQPNFISVCSSLLHNGTLVDVTLAAEGRQLQAHKIVLSACSSYFQTLFTTNPCQHPIVILKDVQYDDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPTDAATLTKSDSKSSSDQPEQLQSSGTDSLWGSSESQFQQQQPQPHHHHHHHQQSQTQQIHQLRRSPSPLGPGTSPATRRKRLRKSSNNGSGDRITEDHSGVDTGGNINLSQMGQMSFSGNSSGLGHTLHTKIIKESASVDVDSHQQDSSPDSLDDGNGHPHTMQIKPETDLSVPQTLPLDISGGTTPSEHDGPNASCSQSSHSGLQWTVVDSNYSRFSLSSCQPNLIGNGNTNNPNGGLSNQSTTTNNNNNNNNNPSNTGNQNTTDHQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHRQQQQNTNNSNGNNSSAPSGLSHTQQQPQHGHIQMHYTNSSYSPQIISVNSLVGSYSQNLSTPTSPNESAMVQSVYSQGPTPTQSPVHQMNTVPSGLTTTSAASNAGSGSGAGNSANGNNTGSSGSLTTTVVNTAGNSGTGVVNNSQVQSGNQTTQTAIVVKRKRSVNPQGDENFIRALEAVRSGGIGFCKAARLYGVNNRTLWLEYKKRGYPISRPSIKSRVVKQENLSPSPTPTNEETTIENYEHINQSAINMQVPPTSDTPTPLMCTPHTHPMGVMGFLDTRHMDFPTSIHTMSRQRYVDSGVNVNPSAMNLQSINFNSI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00310171;
90% Identity: iTF_00188252;
80% Identity: iTF_01396631;