Basic Information

Gene Symbol
lilli
Assembly
GCA_030142455.1
Location
JARQTB010000914.1:443567-469819[+]

Transcription Factor Domain

TF Family
AF-4
Domain
AF-4 domain
PFAM
PF05110
TF Group
Unclassified Structure
Description
This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 7 0.00026 5.4 6.3 17.9 25 214 34 203 27 233 0.50
2 7 1.6e-09 3.3e-05 23.5 1.3 342 444 253 352 231 362 0.75
3 7 0.24 4.9e+03 -3.4 25.1 445 499 439 491 422 515 0.53
4 7 1 2e+04 -9.3 17.1 128 242 532 639 502 669 0.37
5 7 1 2e+04 -5.6 16.0 457 501 665 705 642 712 0.55
6 7 0.57 1.2e+04 -4.7 8.7 440 502 748 809 712 817 0.50
7 7 0.016 3.3e+02 0.4 9.3 122 220 1064 1131 1020 1200 0.39

Sequence Information

Coding Sequence
ATGTCGGTCCAGGCGGAGCAAGCGGCTGCTGGAGGAGGTCCTGACAGCCGTCACGGTCACCGTCATCACGGGCATCATCATGGACACCATCATCATTCGAATCCTCTTGCAGCCACCGCTCCGCTCTTCCGTGCTCCCGTGAGGGTAAATCCCGACGCCCAGGATCGCGCCACTCAGCAAATCCAATCGAAGCTGGGCAACTACTCGCTGGTGAAGCACTTTGTGCTCGACGACTCGAAGAGGCTCATCGGCATCGAGGGCGTCCCTGCGAGTCCGGCCCCGGCCTCAGCCTCCGGCCTCAGGACAAGTTCAAGTTCGGGGACGACCTCGAGGAGCTCACCGTCCGCCCAGGAGTTCAAGAAACCTGGCGGTCCACGCACCAGCTCCAGCGGCTCGAGCAGTCACGCTTCTCAGCGCGGTGGGTTCGTCAAACCGGCTGACGGGAAACCACCCTACAGTGGCAGGGGCAGCTACTCGGGACAACCCGTTAAACACGGCGGCAGCAGTAACGATCATCGCAGCCATGGGCTTCTTCCCGCCAAGGGTCCTCCTCCTAATTCATCCTCCTTGTCCTCCTCCACGTCAAGTATCTCCTCCTCGTCCAGCTCAGCTAATCTCAGTGGAAACGCAAACTTCGACGGCGCAGCTGGAAACGTCAGCGCCGGAAGCACCGGAAGTACCGGAAGCAGGATACACTCGGTGGCTGGTCGACTGCCCAGGCTGCCTCTGGATAATGGAACGAATAGCCGGCACGGAGCTACCGAAAATTCTGCCGACCTTGAAAATATCCTGAAAGAGATGATGATGCCGCCGACTCCGCTGACGGCGATCGCACAGACCCCGAGGAAAGAACTGGAGTCAAAGTTCACTTTCAATCCTGTACTCGCCAAGctGACCGAAGTCCCACCTGGCGAAGCCGCGAAGCCTCAAAGAGAGAGGCACCCGTCCAACAGGCTGTCTGCGGACTTGGAGCGCGACCTGAGCCTTTCCGAGGACAGCGAGGATGAGGAGGGAACCAAGGGTGCGTCACCGAGAGCGTCGAGGAACGCGAGAAGTCCGGACCTTACGGTCGACCTTTCGACGCCGCTGATACCGGCCATGACACCCGCTCCACCACCTCTAGCTCCTATGTCGCCGATGGGAATGTCGCCCGTTGGTCCTCTCTCGTCCCCGAGACCTCTGAGTCCTCCTCGAGTATCCTCCCCGACGAAAGAAGCAAGCGCGATGGGCGCACTCTCGCCGTCACCTGTGCCGCCAATGCCACAGAGTCCTCTCGACAAAGAAAAGCTCTCAGAACTTTCACCCTTACCGACGGACCAGAGGCCGCCGAGTCCTCCCCTGGAAGCGATGCACCAGAGTTCAGTTAGCGCAAGTTCCAGCTCTGATTCCGGATCGGATTCGGGCTCGGATAGCAGCGACGACTCTGAGGACGAGGTAGCACAACCTCCGCCTAAGGGACCATCGACGCCGCCTTCAGTGTCTCCGTCGGCACCTGCCGAGGAAGCTCCGCCAGCTGTCGAGGAATCAAAACTCCGCTGGAACCTCAGTTCGTTTTTCACGAAACCTCCGCCGCAGCAAGGCGATCAGAAtgctgaaaataaatcttcaCAGGATGATGTGCGAGGAGACGGATCACCGAGTGCTGTGTCCTCAGAAACGAGATCTCATCATCGGGATGCTGGGCACTCTGGACATTCGGGTCACACAGGGCACGATTGGAAACTCGATGAAGCTCTCAAGAGAACGCACAATTCGGCTATGCTGAGTCTCTTGAGTGACAGCGATCATCATTCCGAATCTGATAAGAGGCAGAGCGTAATCGAGGAGGCTCGTCAACAGACGGAAAAGATTAAGCCTCCGGATGCCAAGAAGAGAGGACGACCGCGCAAACCTACCAAGAGTCCAAAAAGCCATCGGAACTTTGACGAGGGTGGTGGAAAGACCAAAAGAAGCAGCAGGACTCGCATTAATAATAGTCCAAAAAAGAAGCCGATCTCAAAGCCGACGGTTTCTACTAGCGAGGATGCTAGCGATGCTCAATCGCAGGATGCTTCCAGTGATTCCGACAGCGAGCGTCCAAGTCCACTGAGACATTCAACAGCCTCTCCAATGTCCCGGAGTGTCAGTGACAAGTGTCGGCCACGGCTGAGTGTCTCCTCGAGCGAGGATGAGGGACCTCCGAGCAAGCACAATGTCCCGGAGGATGTTTCTTGGACGAGGTTGTCGATTAAGAGAAATAAGCTTGCTGAACAGTCGGCGAAGAAGgccgagaaaaagaaagcttcGACGAAAACAAAATCCAGGAGGTCGAGACCAAGACTTCCTAGTGCACCTGCCGGTCCCTCGGATTCTGACAGCGAGACCGAAGCGGCCCCAATTAATACTCGTATTCAGGTCGCGAGGGTGCCACCCAGGCCAAGACCTCCTCCCAACAGGACCACGTCACCCGACAATTCTGATAGCGACAATAGTCCAGCCCCGAAGCTCCAGGAGGAAGGAGGAAATGTACAGGACAAGAAGAAGAGTGATACGTTGCGTAAACTCTTTTACGTGAACAAGGGCGGAGCAAAGTGTGGAGGGAAGGGTGCAAAAGGTGGTGGCAAAGTCGGTGGCAAATGCGGAATCTACGTGGAGGAATACACATCAGCTTCGATCCTTACGGGGGGCGAGAGTCCGTACAAGAGGCCCTCCTCGCAGATGTCGATTCCGCCGTTAAGATACGTAAATGGTATTCCGAGTATTATGTGCCGACTGGATCTCAGTCGACTCTCCCACGTGCCCCAGCCTTCGCGCGGTCAGGAATTGAGGCAACACACTGAGCTGCCGGACACCAGGCCGTCTTCGAGGCAGGCTGCCATTCTGGCCCCGCCACGACCTTCAACCCCTGAGGAGGGCGAAATTGTCGACGCTCCTCTGCCTTCGAAAATACGGACTCATAGTGAGAATAGTAATGCCCTTGAGGGCGAGATTCCCGTTAAAATTCGGGGCATTAAAGCCGAACCGATGTCGGACACGAAGAACTTGTTAGGTGGAATCGGTGCTCACAGTGGCGGCGGTAGTGGTTTCGTTGGTCCTGTTTCTAGTATAGCTAGTGCTAGTACTCTTAACGGAAATCCCAGTGCCAGAGCCAGTGGTACCAGTGGTGCTAATGGCAGCAGTACTGGTGCTACTGCCAGTAGCAGTACTGTCGGCGGCGGTAACAGTGGAAGTGCGCGCAAACGGAAACGCAATCTGAGTTGTAGTTCTGTGTCTAGCTTGAGTACCGTATGTTCCGTGGACTCGAAGGCGAAACAGGGTTCCTCCGAGCacaaggagaaaaagaagaggaaacgGAAGCATGCCGATGCCGAATCCCTCACGCCGAGGCCTTCTTCCAGTCAGAGTGACGTTCAGCCTACGAATCACGAGCGGGAAGACAATGCGGACACGAGCCTTCTTccgccaccgccgccacctcatcgtatttattattcttacttCAACCCGCAGAACGAGATTGTCGAGGACCAGGATAGGGACCAGCATCAGTACCTGACGGAAGCTAAACGACTAAAACATAAGGCCGACGAGGAGTGCGACCTGACGGCCCAAGGAATGCTTTATCTCGAGGCTGTACTCTACTTCCTGTTGACCGGCCACGCGATGGAATCCGATCCGTTGACCGAGCGGGCCTCCTTCACCATGTATAAAGACACTTTAAGTCTTATCAAGTATATCTCCTCCAAGTTCAAAAGTCAACAGAACAATTCCCCCGAGAGCAGTATACACAATAAGTTGGCTATTTTGAGCCTATGGTGCCAGTCCCTCATATACTTGAAGCTCTTCAAGATGCGTAAACATGAAGTCAAAGATTATCAAAAGCTCCTGGCTGATTATTATCAAAAGCTAACTCAGGCATCTTTCGTCCAGCCCGAAGGACAAGGGACGCCATCGCCTTTGTCTCCGACTCCCTCGCCAGCTGGCTCTGTTGGTTCGGTCGGAAGTCAAAGCTCTGGTTACAGCAGCGGCGAGCTGGCTAATCGAGGTGCAGCTGGACAACCTCAGGGTCCTCCTTGCTTAAACGTACCCCTCAGCGTGCACCACGCAATGCAGAAGCAAAATCATCACTTTGGTCTGTTGATGAACTGCCACGAACTCTGGGACCAAGCTAACGCTCTGGTCACGGATAAGCATAGAGATTTCTTTATCGAGCTGGACGAAAGGATAGGTCCGCTCACATTGAAGAGCTCGCTGCGGGATTTAGTTCGCTACGTTCAGGCTGGGATAAAGAAGTTGCGAGCCCTCTGA
Protein Sequence
MSVQAEQAAAGGGPDSRHGHRHHGHHHGHHHHSNPLAATAPLFRAPVRVNPDAQDRATQQIQSKLGNYSLVKHFVLDDSKRLIGIEGVPASPAPASASGLRTSSSSGTTSRSSPSAQEFKKPGGPRTSSSGSSSHASQRGGFVKPADGKPPYSGRGSYSGQPVKHGGSSNDHRSHGLLPAKGPPPNSSSLSSSTSSISSSSSSANLSGNANFDGAAGNVSAGSTGSTGSRIHSVAGRLPRLPLDNGTNSRHGATENSADLENILKEMMMPPTPLTAIAQTPRKELESKFTFNPVLAKLTEVPPGEAAKPQRERHPSNRLSADLERDLSLSEDSEDEEGTKGASPRASRNARSPDLTVDLSTPLIPAMTPAPPPLAPMSPMGMSPVGPLSSPRPLSPPRVSSPTKEASAMGALSPSPVPPMPQSPLDKEKLSELSPLPTDQRPPSPPLEAMHQSSVSASSSSDSGSDSGSDSSDDSEDEVAQPPPKGPSTPPSVSPSAPAEEAPPAVEESKLRWNLSSFFTKPPPQQGDQNAENKSSQDDVRGDGSPSAVSSETRSHHRDAGHSGHSGHTGHDWKLDEALKRTHNSAMLSLLSDSDHHSESDKRQSVIEEARQQTEKIKPPDAKKRGRPRKPTKSPKSHRNFDEGGGKTKRSSRTRINNSPKKKPISKPTVSTSEDASDAQSQDASSDSDSERPSPLRHSTASPMSRSVSDKCRPRLSVSSSEDEGPPSKHNVPEDVSWTRLSIKRNKLAEQSAKKAEKKKASTKTKSRRSRPRLPSAPAGPSDSDSETEAAPINTRIQVARVPPRPRPPPNRTTSPDNSDSDNSPAPKLQEEGGNVQDKKKSDTLRKLFYVNKGGAKCGGKGAKGGGKVGGKCGIYVEEYTSASILTGGESPYKRPSSQMSIPPLRYVNGIPSIMCRLDLSRLSHVPQPSRGQELRQHTELPDTRPSSRQAAILAPPRPSTPEEGEIVDAPLPSKIRTHSENSNALEGEIPVKIRGIKAEPMSDTKNLLGGIGAHSGGGSGFVGPVSSIASASTLNGNPSARASGTSGANGSSTGATASSSTVGGGNSGSARKRKRNLSCSSVSSLSTVCSVDSKAKQGSSEHKEKKKRKRKHADAESLTPRPSSSQSDVQPTNHEREDNADTSLLPPPPPPHRIYYSYFNPQNEIVEDQDRDQHQYLTEAKRLKHKADEECDLTAQGMLYLEAVLYFLLTGHAMESDPLTERASFTMYKDTLSLIKYISSKFKSQQNNSPESSIHNKLAILSLWCQSLIYLKLFKMRKHEVKDYQKLLADYYQKLTQASFVQPEGQGTPSPLSPTPSPAGSVGSVGSQSSGYSSGELANRGAAGQPQGPPCLNVPLSVHHAMQKQNHHFGLLMNCHELWDQANALVTDKHRDFFIELDERIGPLTLKSSLRDLVRYVQAGIKKLRAL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2