Basic Information

Gene Symbol
lilli_1
Assembly
GCA_030142355.1
Location
JARQSY010000915.1:442211-466826[+]

Transcription Factor Domain

TF Family
AF-4
Domain
AF-4 domain
PFAM
PF05110
TF Group
Unclassified Structure
Description
This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 8 3.5e-08 0.00083 19.1 0.4 25 130 34 139 27 176 0.63
2 8 1 2.4e+04 -16.4 23.4 461 481 185 205 158 222 0.59
3 8 1.6e-09 3.7e-05 23.6 1.3 342 444 251 350 227 360 0.75
4 8 0.21 5e+03 -3.3 26.6 442 499 435 490 419 519 0.56
5 8 1 2.4e+04 -9.3 16.9 128 242 531 638 501 663 0.38
6 8 1 2.4e+04 -7.5 17.6 459 501 662 704 645 712 0.54
7 8 0.31 7.4e+03 -3.8 10.0 440 502 747 808 713 814 0.48
8 8 0.019 4.5e+02 0.2 9.5 116 197 1056 1141 1023 1202 0.39

Sequence Information

Coding Sequence
ATGTCGGTCCAGGCGGAGCAAGCGGCTGCTGGAGGAGGTCCTGACAGCCGTCACGGTCACCGTCATCACGGGCATCATCATGGACACCATCATCATTCGAATCCTCTCGCAGCCACCGCTCCGCTCTTCCGTGCTCCCGTGAGGGTAAATCCCGACGCCCAGGATCGCGCCACTCAGCAAATCCAATCGAAGCTGGGCAACTACTCGCTGGTGAAGCACTTCGTACTCGACGACTCGAAGAGGCTCATCGGCATCGAGGGCGTCCCTGCGAGTCCGGCCCCGGCCTCAGCCTCCGGCCTCAGGACAAGTTCAAGTTCAGGGACGACCTCGAGGAGCTCACCGTCCGCCCAGGAGTTCAAGAAACCTGGAGGTCCACGCACCAGCTCCGGCGGCTCCAGTAGTCACGCTTCTCAGCGCGGTGGGTTCGTCAAACCGGCTGACGGGAAACCACCCTACAGTGGCAGGGGCAGCTACTCGGGGCAACCCGTTAAACACGGCGGCAGCAGTAACGATCATCGCAGCCATGGTCTACTTCCCGCCAAGGGTCCTCCTCCTAattcatcctcatcctcctcctcgtccacGTCAAGTGTCTCCTCTTCGTCCAGCTCAGCCAATCTCAGTGGGAACGCAAACTTCGACGGCGCCGCTGGAAACGTCAGCACCGGAAGTACCGGAAGCAGGATACACTCGGTGGCTGGTCGACTGCCCAGGCTGCCTCTGGATAACGGAACGAATAGCCGGCACGGAGCTACCGAAAATTCTGCCGACCTTGAAAATATCCTGAAAGAGATGATGATGCCGCCGACTCCTCTGACTGCGATCGCACAGACCCCGAGGAAAGAACTGGAGTCAAAGTTCACTTTCAATCCTGTACTCGCCAAGctGACCGAAGTCCCACCTGGAGAAGCCGCGAAGCCTCAAAGAGAGAGGCACCCGTCCAACAGGCTGTCTGCGGACTTGGAGCGCGACCTGAGCCTTTCCGAGGACAGCGAGGATGAGGAGGGAACCAAGGGTGCGTCACCGAGAGCGTCGAGGAACGCGAGAAGTCCGGACCTTACGGTCGAcCTTTCGACGCCGCTGATACCGGCCATGACACCCGCTCCACCACCTCTAGCTCCTATGTCGCCGATGGGGATGTCGCCCGTTGGTCCTCTATCGTCCCCGAGACCTTTGAGTCCTCCTCGAGTATCCTCCCCGACGAAAGAAGCAAGCGCGATGGGCGTACTCTCGCAGTCACCTGTGCCGCCAATGCCACAGAGTCCTCTCGACAAGTCAGAAAAGCTCTCAGAACTTTCACCCTTACCGACGGACCAGAGGCCGCCGAGTCCTCCCGTGGAAGCGATGCACCAGAGTTCGGTTAGCGCAAGTTCCAGCTCCGATTCCGGATCGGACTCTGGCTCGGATAGCAGCGACGACTCTGAGGACGAGGTAGCACAACCTCCGCCTAAGGGACCATCGACGCCGCCTTCAGTCTCTCCGTCGGCACCTGCCGAGGATGCTCCGCCAGCTGTCGAGGAATCAAAACTCCGCTGGAACCTCAGTTCGTTTTTCACGAAACCTCCGCCGCAGCAAGGCGATCAGAatgctgaaaataaatcttcaCAGGACGATGTGCGAGGAGACGGATCACCGAGTGCTGTGTCCTCAGAAACGAGATCTCATCATCGGGATGCTGGACACTCTGGACACTCGGGTCACACAGGGCACGATTGGAAACTCGATGAAGCTCTCAAGAGAACGCACAATTCGGCTATGCTGAGTCTCTTGAGTGACAGCGATCATCATTCCGAATCCGATAAGAGGCAGAGCGTCATCGAGGAGGCTCGTCAACAGACGGAAAAGATTAAGCCTCCGGATGCCAAGAAGAGAGGACGACCGCGTAAACCTACCAAGAGTCCAAAAAGCCATCGGAACTTTGACGAGGGTGGTGGAAAGAACAAAAGAAGCAGCAGGACTCGCATTAATAACAGTCCAAAAAAGAAGCCGATCTCAAAGCCGACGGTTTCTACTAGCGAGGATGCTAGCGATGCTCAATCGCAGGATGCTTCCAGCGATTCCGACAGCGAGCGTCCAAGTCCACTGAGACATTCAACAGCCTCTCCAGTGTCCCGGAGTGTCAGTGACAAGTGTCGGCCACGGCTGAGTGTCTCCTCGAGCGAGGACGAGGGACCTCCGAGCAAGCACAACGTCCCGGAGGATGTTTCTTGGACGAGGTTGTCGATTAAGAGAAATAAGCTTGCTGAACAGTCGGCAAAGAAGgccgagaaaaagaaagcttcGACGAAAACAAAATCCAGGAGGTCGAGACCAAGACTTTCTAGTGCACCTGCCGGTCCCTCGGATTCCGACAGCGAGACCGAAGCGGCCCCAATTAATACTCGTATTCAGGTCGCAAGGGTGCCACCCAGGCCAAGACCTCCTCCCAACAGGACCACGTCACCCGACAATTCTGATAGCGACAATAGCCCAGCCCCGAAGCTCCAGGAGGAAGGAGGAAATGTACAGGACAAGAAGAAGAGTGATACGTTGCGTAAACTCTTTTACGTGAACAAGGGCGGAGCAAAGTGTGGAGGAAAGGGTGCAAAAGGTGGTGGCAAAGTCGGCGGCAAATGCGGAATCTACGTGGAGGAATACACATCAGCTTCGATCCTTACGGGCGGCGAGAGTCCGTACAAGAGGCCATCCTCGCAGATGTCGATTCCGCCGTTAAGATACGTAAATGGTATTCCGAGTATTATGTGCCGACTGGATCTCAGTCGACTTTCCCACGTGCCCCAGCCATCGCGCGGTCAAGAATTGAGGCAACACACCGAGCTGCCGGACACCAGGCCGTCCTCGAGGCAGGCTGCCATTCTGGCCCCGCCACGACCTTCAACCCCTGAGGAGGGCGAAATTGTCGACACTCCTCTGCCTTCGAAAATACGGACTCACAGTGAGAATAGCAATGCCCTTGAGGGTGAGATTCCCGTTAAAATTCGGGGCATTAAAGCCGAACCGATCTCGGACACGAAGAACTTGTTAGGTGGAATCGGTGCTCACAGTGGCGGCGGTAGTGGTTTCGTTGGTCCTGTTTCTAGTATAGCTAGTGGTAGTACTCTTAACGGAAATCCCAGTGCCAGTGCCAGTGGTACCAGTGGTGCTAATGGCAGCAGTACTGGTGCTACTGCCAGTAGCAGTACTGTCGGCGGCGGTAACAGTGGAAGTGCGCGCAAACGGAAACGCAATCTGAGTTGTAGTTCTGTGTCTAGCTTGAGTACCGTATGTTCTGTGGACTCGAAGGCGAAACAGGGTTCCTCCGAGcacaaggagaaaaagaagaggaaacgGAAGCATGCCGATGACGAATCCCTCACGCCGAGGCCTTCTTCCAGTCAGAGTGACGTTCAGCCTACGAATCACGAGCGGGAAGACAATGCGGACACGAGCCTTCTTccgccaccgccgccacctcaccgtatttattattcttacttCAACCCGCAGAACGAGATTGTCGAGGACCAGGATAGGGACCAGCATCAGTACCTGACGGAAGCTAAACGACTAAAACATAAGGCCGACGAGGAGTGCGACCTGACGGCCCAAGGAATGCTTTATCTCGAGGCTGTACTCTACTTCCTGTTGACCGGCCACGCGATGGAATCCGATCCGTTGACCGAGCGAGCCTCCTTCACCATGTATAAAGACACTTTAAGTCTTATCAAGTATATCTCCTCCAAGTTCAAAAGTCAACAGAACAATTCCCCCGAGAGCAGTATACACAATAAGTTGGCTATTTTGAGCCTATGGTGCCAGTCCCTCATATACTTGAAGCTCTTCAAGATGCGTAAACATGAAGTCAAAGATTATCAAAAGCTCCTGGCTGATTATTATCAAAAGCTAACTCAGGCATCTTTCGTCCAGCCCGAAGGACAAGGGACGCCGTCGCCTCTGTCTCCGACTCCCTCGCCAGCTGGCTCTGTTGGTTCGGTCGGAAGTCAAAGCTCCGGTTACAGCAGCGGCGAGCTGGCTAATCGAGGTGCAGCTGGACAACCTCAGGGTCCTCCTTGCTTAAACGTACCCCTCAGCGTGCACCACGCAATGCAGAAGCAAAATCATCACTTTGGTCTGTTGATGAACTGCCACGAACTCTGGGACCAAGCTAATGCTCTGGTCACGGATAAGCATAGAGATTTCTTTATCGAGCTGGACGAAAGGATAGGTCCGCTCACATTGAAGAGCTCGCTGCGGGATTTAGTTCGCTACGTTCAGGCTGGGATAAAGAAGTTGCGAGCCCTCTGA
Protein Sequence
MSVQAEQAAAGGGPDSRHGHRHHGHHHGHHHHSNPLAATAPLFRAPVRVNPDAQDRATQQIQSKLGNYSLVKHFVLDDSKRLIGIEGVPASPAPASASGLRTSSSSGTTSRSSPSAQEFKKPGGPRTSSGGSSSHASQRGGFVKPADGKPPYSGRGSYSGQPVKHGGSSNDHRSHGLLPAKGPPPNSSSSSSSSTSSVSSSSSSANLSGNANFDGAAGNVSTGSTGSRIHSVAGRLPRLPLDNGTNSRHGATENSADLENILKEMMMPPTPLTAIAQTPRKELESKFTFNPVLAKLTEVPPGEAAKPQRERHPSNRLSADLERDLSLSEDSEDEEGTKGASPRASRNARSPDLTVDLSTPLIPAMTPAPPPLAPMSPMGMSPVGPLSSPRPLSPPRVSSPTKEASAMGVLSQSPVPPMPQSPLDKSEKLSELSPLPTDQRPPSPPVEAMHQSSVSASSSSDSGSDSGSDSSDDSEDEVAQPPPKGPSTPPSVSPSAPAEDAPPAVEESKLRWNLSSFFTKPPPQQGDQNAENKSSQDDVRGDGSPSAVSSETRSHHRDAGHSGHSGHTGHDWKLDEALKRTHNSAMLSLLSDSDHHSESDKRQSVIEEARQQTEKIKPPDAKKRGRPRKPTKSPKSHRNFDEGGGKNKRSSRTRINNSPKKKPISKPTVSTSEDASDAQSQDASSDSDSERPSPLRHSTASPVSRSVSDKCRPRLSVSSSEDEGPPSKHNVPEDVSWTRLSIKRNKLAEQSAKKAEKKKASTKTKSRRSRPRLSSAPAGPSDSDSETEAAPINTRIQVARVPPRPRPPPNRTTSPDNSDSDNSPAPKLQEEGGNVQDKKKSDTLRKLFYVNKGGAKCGGKGAKGGGKVGGKCGIYVEEYTSASILTGGESPYKRPSSQMSIPPLRYVNGIPSIMCRLDLSRLSHVPQPSRGQELRQHTELPDTRPSSRQAAILAPPRPSTPEEGEIVDTPLPSKIRTHSENSNALEGEIPVKIRGIKAEPISDTKNLLGGIGAHSGGGSGFVGPVSSIASGSTLNGNPSASASGTSGANGSSTGATASSSTVGGGNSGSARKRKRNLSCSSVSSLSTVCSVDSKAKQGSSEHKEKKKRKRKHADDESLTPRPSSSQSDVQPTNHEREDNADTSLLPPPPPPHRIYYSYFNPQNEIVEDQDRDQHQYLTEAKRLKHKADEECDLTAQGMLYLEAVLYFLLTGHAMESDPLTERASFTMYKDTLSLIKYISSKFKSQQNNSPESSIHNKLAILSLWCQSLIYLKLFKMRKHEVKDYQKLLADYYQKLTQASFVQPEGQGTPSPLSPTPSPAGSVGSVGSQSSGYSSGELANRGAAGQPQGPPCLNVPLSVHHAMQKQNHHFGLLMNCHELWDQANALVTDKHRDFFIELDERIGPLTLKSSLRDLVRYVQAGIKKLRAL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00295238;
90% Identity
iTF_00253557;
80% Identity
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