Ttro013536.1
Basic Information
- Insect
- Trachelus troglodyta
- Gene Symbol
- lilli
- Assembly
- GCA_030142635.1
- Location
- JARQTJ010000823.1:501254-518314[+]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 7 1 2e+04 -9.2 26.2 44 173 15 134 12 168 0.42 2 7 1.5e-09 3e-05 23.6 1.5 342 444 211 310 184 320 0.75 3 7 0.2 4e+03 -3.2 26.6 443 499 396 450 379 461 0.47 4 7 1 2e+04 -10.4 17.7 126 242 489 598 453 624 0.44 5 7 1 2e+04 -7.2 16.7 465 501 628 664 605 671 0.58 6 7 0.62 1.2e+04 -4.8 8.7 441 502 708 768 674 775 0.51 7 7 0.027 5.4e+02 -0.3 9.8 125 243 1026 1089 981 1158 0.38
Sequence Information
- Coding Sequence
- ATGATTAGGGAAAATAGGGGCCAGGTAAATCCCGACGCACAGGATCGCGCCACTCAGCAAATCCAATCGAAGCTGGGAAATTACTCGCTGGTTAAGCACTTTGTACTCGACGACTCCAAGAGGCTCATCGGCATCGAGGGCGTCCCTGCTAGTCCGGCGCCGGCCTCAGCTTCCGGTCTCAGGACCAGTTCAAGTTCAGGGACTACCTCGAGAAGCTCACCCTCCGCCCAAGAATTTAAGAAACCTGGCGGTCCACGCACGAGCTCCAGCGGCTCGAGCAGTCACGCTTCTCAACGCGGCGGGTTCGTCAAACCGGCCGACGGGAAACCACCTTACAGTGGCAGGGGTAGCTACTCGGGACAACCCGTTAAACACGGCGGCAGCAGTAACGATCATCGTAGCCATGGGCTTCTTCCTGCCAAGGGTCCTCCTCCTAATTCAtcatcctcctcttcttcctccacGTCAAGCATCTCCTCTTCGTCCACCTCAGCCAATCTCAGTGGGAACGCAAACTTCGACGGCGCTGCTGGAAACGTCAGCGCCGGAAGTACCGGAAGCAGGATACACTCGGTGGCTGGTCGACTGCCCAGATTGCCTCTGGATAATGGAACGAACAGCCGGCACGGAGCTACCGAAAATTCTGCCGACCTTGAAAATATCCTGAAAGAGATGATGATGCCGCCGACTCCGCTGACGGCGATCGCACAGACCCCGAGGAAAGAACTGGAGTCAAAGTTCACTTTCAATCCTGTACTCGCCAAGctGACCGAAGTCCCACCTGGCGAAGCCACGAAGCCTCaaagagagaggcacCCGTCCAACAGGCTGTCTGCGGACTTGGAGCGCGACCTGAGCCTTTCCGAGGACAGCGAGGATGAGGAGGGAACCAAGGGTGCGTCACCGAGAGCGTCGAGGAACGCGAGAAGTCCGGACCTTACGGTTGACCTTTCGACACCGCTGATACCGGCCATGACACCCGCTCCACCACCTCTAGCTCCTATGTCGCCGATGGGCATGTCGCCCGATGGTCCTCTTTCTTCCCCGAGACCTCTGAGCCCTCCTCGAGTATCCTCCCCGACGAAAGAAGCAAGCGCGATAGGCGCACTTTCTCCGTCACCTGTACCGCCAATGCCACAGAGTCCTCTCGACAAATCAGAGAAGCTCTCAGAACTTTCACCCTTACCGACGGACCAGAGGCCGCCGAGTCCTCCCGTGGAAGCTACGCACCAGAGTTCAGTTAGCGCAAGTTCCAGCTCCGATTCAGGATCGGACTCGGGCTCGGATAGCAGCGACGACTCTGAGGACGAGGTAGCACAACCTCCGCCTAAGGGACCATCAACGCCGCCTTCGGTGTCTCCGTCGGCACCTGCCGAGGAAGCTCCGCCAGCTGTCGAGGAATCAAAACTCCGCTGGAACCTCAGTTCGTTCTTCGCGAAACCTCCGCCGCAACAAGGCGATCAGAAtgctgaaaataaatcttCACAGGATGATGTGCGAGGAGACGGATCACCGAGTGCTGTGTCCTCAGAAACGAGATCTCATCATCGGGATGCTGGACACTCTGGACATTCGGGTCACACAGGGCACGATTGGAAACTCGATGAAGCTCTCAAGAGAACGCACAATTCGGCTATGCTGAGTCTCTTGAGCGACAGCGATCATCATTCCGAATCTGATAAGAGGCAGAGCGTCATCGAGGAGGCTCGTCAGCAGACGGAAAAGATTAAGCCTCCGGATGCCAAGAAGAGAGGACGACCGCGTAAACCTACAAAGAGTCCAAAAAGCCATCGGAACTTTGACGACGGTGGTGGAAAGAACAAAAGAAGCATCAGGACTCGGATTAATAGTAGTCCAAAAAAGAAGCCGATCTCAAAGCCGACGGTTTCTACTAGCGAGGATGCCAGCGATGCTCAATCGCAGGATGCTTCCAGCGATTCCGACAGCGAGCGTCCAAGTCCACTGAGACACTCAACAGCCTCTCCAGTGTCCAGGAGTGTCAGTGACAAGTGTCGGCCACGGCTGAGTGTCTCCTCGAGCGAGGATGAGGGACCTCCGAGCAAGCACAATGTCCCGGATGATGTTTCTTGGACGAGGTTGtcgattaaaagaaataagctTGCCGAACAGTCGGCAAAGAAGgccgagaaaaagaaagcttCGACGAAAACAAAATCCAGGAGGTCGAGACCACGACTTCCCAGTGCACCTGCCGGTCCCTCGGATTCCGACAGCGAGACCGAAGCGGCCCCAATTAATACTCGTATTCAGGTCGCAAGGGTGCCACCCAGGCCAAGACCTCCTCCCAACAGGACCACGTCACCGGACAATTCCGATAGCGACAATAGTCCCGCCCCGAAGCTCcaggaggaaggaggaaatGTACAGGACAAGAAGAAGAGTGATACGTTGCGTAAACTCTTTTACGGGAACAAGGGCGGAGCAAAGTGTGGAGGAAAGGGTGCAAAAGGTGGTGGGAAAGTCGGCGGCAAATGCGGAATCTACGTGGAGGAATACACATCAGCTTCGATCCTCACGGGCGGCGAGAGTCCGTACAAGAGGCCGTCCTCGCAGATGTCGATTCCGCCTTTAAGATACGTAAATGGTATCCCGAGTATTATGTGCCGGCTAGATCTCAGTCGACTCTCCCACGTGCCCCAACCATCGCGCGGTCAAGAATTGAGACAACACACTGAGCTGCCGGACACCAGGCCGTCCTCTAGGCAGGCTGCCGTTCTGGCCCCGCCCCGACCGTCAACCCCTGAGGAGGGCGAAATTGTCGACACTCCTTTGCCTTCGAAAATACGGACTCACAGTGAGAATAGTAATGCCCTTGAGGGCGAGATTCCCGTTAAAATTCGGGGCATTAAAGCCGAACCGATCTCGGACACGAAGAACTTGTTAGGTGGAATCGGTGCTCACAGTGGCGGCGGTAGTGGTTTCGTTGGTCCTGTTTCTAGTATAGCTAGTGCTAGTGCTCTTAACGGGAATCCCAGTGCCAGTGCCAGTGGTACCAGTGGTACAAATGGCAGCAGTACTGGTGCTACTGCCAGTAGCAGTACTGTCGGCGGCGGTAACAGTGGAAGTGCGCGCAAACGGAAACGCAATCTGAGTTGTAGTTCTGTGTCTAGCTTGAGTACCGTTTGTTCAGTGGACTCGAAGGCGAAACACGGTTCCTCCGAGcacaaggagaaaaagaagaggaaacgGAAGCATGCCGATGCCGAATCCCTCACGCCGAGGCCTTCTTCCAGTCAGAGCGACGTTCAGCCTACGAATCACGAGCGGGAAGACAATGCGGACACGAGCCTTCTtccgccaccgccgccacctcatcgtatttattattcttacttCAACCCGCAGAACGAGATTGTCGAGGACCAGGATAGGGACCAGCATCAGTACCTGACGGAAGCTAAACGACTAAAACATAAGGCCGACGAGGAGTGCGACCTGACGGCCCAAGGAATGCTTTACCTCGAGGCTGTACTCTATTTCCTGTTGACCGGTCACGCGATGGAATCCGATCCGTTGACCGAGCGGGCCTCCTTCACCATGTATAAAGACACTTTAAGTCTTATCAAGTATATCTCCTCCAAATTCAAAAGTCAACAGAACAATTCCCCCGAGAGCAGTATACACAATAAGTTGGCTATTTTGAGccTATGGTGCCAGTCCCTCATATACTTGAAGCTCTTCAAGATGCGTAAACATGAAGTCAAAGATTATCAAAAGCTCCTGGCTGATTACTATCAAAAGCTAACTCAGGCATCTTTCGTCCAGCCCGAAGGACAAGGGACGCCATCGCCTTTGTCTCCGACTCCCTCGCCAGCTGGCTCTGTTGGTTCGGTCGGAAGTCAAAGCTCTGGTTACAGCAGCGGCGAGCTGGCTAATCGAGGTGCAGCTGGACAACCTCAGGGTCCTCCTTGCTTAAACGTACCCCTAAATGTGCATCACGCAATGCAGAAGCAAAATCATCACTTTGGTCTGTTGATGAACTGCCACGAACTCTGGGACCAAGCTAATGCTCTGGTCACGGATAAGCATAGAGATTTCTTTATCGAGCTGGACGAAAGGATAGGTCCGCTCACATTGAAGAGCTCCCTGCGAGATTTAGTTCGCTACGTTCAGGCTGGGATAAAGAAGTTACGAGCCCTCTGA
- Protein Sequence
- MIRENRGQVNPDAQDRATQQIQSKLGNYSLVKHFVLDDSKRLIGIEGVPASPAPASASGLRTSSSSGTTSRSSPSAQEFKKPGGPRTSSSGSSSHASQRGGFVKPADGKPPYSGRGSYSGQPVKHGGSSNDHRSHGLLPAKGPPPNSSSSSSSSTSSISSSSTSANLSGNANFDGAAGNVSAGSTGSRIHSVAGRLPRLPLDNGTNSRHGATENSADLENILKEMMMPPTPLTAIAQTPRKELESKFTFNPVLAKLTEVPPGEATKPQRERHPSNRLSADLERDLSLSEDSEDEEGTKGASPRASRNARSPDLTVDLSTPLIPAMTPAPPPLAPMSPMGMSPDGPLSSPRPLSPPRVSSPTKEASAIGALSPSPVPPMPQSPLDKSEKLSELSPLPTDQRPPSPPVEATHQSSVSASSSSDSGSDSGSDSSDDSEDEVAQPPPKGPSTPPSVSPSAPAEEAPPAVEESKLRWNLSSFFAKPPPQQGDQNAENKSSQDDVRGDGSPSAVSSETRSHHRDAGHSGHSGHTGHDWKLDEALKRTHNSAMLSLLSDSDHHSESDKRQSVIEEARQQTEKIKPPDAKKRGRPRKPTKSPKSHRNFDDGGGKNKRSIRTRINSSPKKKPISKPTVSTSEDASDAQSQDASSDSDSERPSPLRHSTASPVSRSVSDKCRPRLSVSSSEDEGPPSKHNVPDDVSWTRLSIKRNKLAEQSAKKAEKKKASTKTKSRRSRPRLPSAPAGPSDSDSETEAAPINTRIQVARVPPRPRPPPNRTTSPDNSDSDNSPAPKLQEEGGNVQDKKKSDTLRKLFYGNKGGAKCGGKGAKGGGKVGGKCGIYVEEYTSASILTGGESPYKRPSSQMSIPPLRYVNGIPSIMCRLDLSRLSHVPQPSRGQELRQHTELPDTRPSSRQAAVLAPPRPSTPEEGEIVDTPLPSKIRTHSENSNALEGEIPVKIRGIKAEPISDTKNLLGGIGAHSGGGSGFVGPVSSIASASALNGNPSASASGTSGTNGSSTGATASSSTVGGGNSGSARKRKRNLSCSSVSSLSTVCSVDSKAKHGSSEHKEKKKRKRKHADAESLTPRPSSSQSDVQPTNHEREDNADTSLLPPPPPPHRIYYSYFNPQNEIVEDQDRDQHQYLTEAKRLKHKADEECDLTAQGMLYLEAVLYFLLTGHAMESDPLTERASFTMYKDTLSLIKYISSKFKSQQNNSPESSIHNKLAILSLWCQSLIYLKLFKMRKHEVKDYQKLLADYYQKLTQASFVQPEGQGTPSPLSPTPSPAGSVGSVGSQSSGYSSGELANRGAAGQPQGPPCLNVPLNVHHAMQKQNHHFGLLMNCHELWDQANALVTDKHRDFFIELDERIGPLTLKSSLRDLVRYVQAGIKKLRAL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00295238;
- 90% Identity
- iTF_00253557;
- 80% Identity
- -