Basic Information

Gene Symbol
lilli
Assembly
GCA_030142285.1
Location
JARQSV010000774.1:601536-619254[+]

Transcription Factor Domain

TF Family
AF-4
Domain
AF-4 domain
PFAM
PF05110
TF Group
Unclassified Structure
Description
This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 7 0.35 6.6e+03 -4.0 28.3 44 214 15 175 12 187 0.44
2 7 5.7e-10 1.1e-05 25.0 1.3 327 444 212 327 196 337 0.74
3 7 0.13 2.5e+03 -2.6 25.9 441 499 411 467 396 478 0.49
4 7 1 1.9e+04 -10.8 19.2 127 243 507 619 475 646 0.36
5 7 1 1.9e+04 -7.1 17.0 442 499 635 682 616 691 0.50
6 7 0.68 1.3e+04 -4.9 8.9 441 502 728 788 694 797 0.51
7 7 0.012 2.3e+02 0.8 10.1 123 224 1023 1121 974 1176 0.46

Sequence Information

Coding Sequence
ATGATTAGGGAAAATAGGGACCAGGTTAATCCCGACGCACAGGATCGCGCCACTCAGCAGATCCAATCGAAGCTGGGCAATTACTCGCTGGTGAAGCACTTTGTACTCGACGACTCGAAGAGGCTGATCGGCATCGAGGGCGTCCCTGCTAGTCCGGCGCCAGCCTCGGCCTCCGCCCTCAGCAGGACCAGTTCAAGTTCAGGGACTACCTCGAGAAGCTCACCGTCCGCCCAAGAATTTAAGAAACCTGGCGGTCCGCGCACGAGCTCCAGCGGCTCGAGTAGTCACGCTTCTCAGCGCGGTGGGTTCGTAAAACCGGCTGACGGGAAACCACCCTACAGTGGCAGGGGTAGCTACTCGGGACAACCCGTCAAACACGGTGGCAGCAGTAACGACCATCGCAGCCATGGGCTTCTTCCTGCCAAGGGTCCTCCTCCTAATttatcctcctcctcctccaccaccaccaccacctcctcctcttcctcctcctccacgtCAAGTATCTCCTCTTCGTCCACCTCAGCCAATCTCAGTGGAAATGCAAACTTTGACGGCGCTGCTGGAAACGTCAGCGCCGGAAGCACCGGAAGCACCGGAAGTACCGGAAGCAGGATACACTCGGTGGCTGGTCGACTGCCCAGGTTGCCTCTGGATAGTGGAACGAATAGCCGTCACGGAACTACCGAAAATTCTGCCGACCTCGAGAATATCCTGAAAGAGATGATGATGCCGCCGACCCCGCTGACGGCGATCGCACAGACCCCGAGGAAGGAACTCGAGTCAAAGTTCACCTTCAATCCTGTACTCGCCAAGctGACCGAAGTCCCACCTGGCGAAGCTGCGAAGCCTCaaagagagaggcaCCCGTCCAACAGGCTGTCTGCGGACTTGGAGCGCGACCTGAGCCTCTCCGAGGACAGCGAGGATGAGGAGGGAACCAAGGGTGCGTCACCGAGAGCATCGAGGAACGCGAGAAGTCCGGACCTTACGGTCGACCTTTCGACACCGCTGATACCGGCCATGACACCCGCTCCGCCACCTCTGGCTCCTATGTCGCCGATGGGCATGTCGCCCGTTGGTCCTCTCTCTTCCCCGAGACCTCTGAGCCCTCCTCGAGGATCATCCCCGACGAAGGAAACAAGCGCGATGGGCGCACTCTCGCCGTCGCCCGTGCCGCCGATGCCCCAGAGTCCTCTAGAAAAGTCAGAAAAGCTCTCCGAACTTTCACCCTTACCGACGGACCAGAGGCCGCCGAGTCCTCCCGTGGAAGCGATGCACCAGAGTTCAGTTAGCGCAAGTTCCAGCTCCGATTCAGGATCGGACTCTGGCTCCGATAGCAGCGACGACTCCGAGGATGAGGTCGCTCAGCCTCCGCCCAAGGGACCATCCACGCCACCTTCGGTGTCTCCGTCGGCACCTGCCGAGGAGGCTCCGCCGGCTGTCGAGGAATCGAAGCTCCGCTGGAACCTCAGTTCGTTCTTCACGAAACCTCCGCCGCAGCAAGGCGATCAGAatgctgaaaataaatcttcACAGGATGACGTGCGAGGAGACGGATCACCCAGTGCTGTATCCTCGGAAACGAGATCTCATCATCGGGATGCTGGACACTCTGGACACTCTGGACACTCGGGTCACACAGGGCACGATTGGAAACTCGACGAAGCTCTCAAGAGAACGCACAATTCGGCCATGCTGAGTCTCTTGAGCGACAGCGATCATCATTCGGAGTCTGATAAGAGGCAGAGCGGCATCGAGGAGGCTCGTCAACCGACGGAAAAGACTAAGCCTCCGGACGCCAAGAAGAGAGGACGACCGCGTAAGCCTACCAAGAGTCCAAAGAGCCATCGGAACTTCGACGACAGCGGCGGAAAGAACAAGAGAAGCAGCAGGACTCGCGTTAACAATAGTCCAAAGAAGAAGCCGATCTCAAAGCCGACGGTTTCCACTAGCGAGGACGCCAGCGACGCCCAATCGCAGGATGGATCCAGCGATTCCGACAGCGAGCGTCCAAGTCCACTGAGACACTCAACAGGCTCTCCGGTGTCCAGGAGTCTCAGTGACAAGTGTCGGCCCCGGCTGAGCGTCTCCTCCAGCGAGGATGAGGGACCTCCGAGCAAGCACAACGTCCCGGAGGATGTCTCTTGGACGAGGCTGTCGATTAAAAGGAACAAACTTGCTGAGCAGTCGGCCAAGAAggctgagaaaaagaaagcttcGACGAAAACAAAGTCCAGGAGGTCGAGACCACGACTTCCCAGTGCGCCTGCCGGTCCCTCGGATTCCGACAGCGAGACCGAAGCGGCCCCAATTAATACTCGTATCCAGGTCGCAAGGGTCCCACCCAGGCCAAGGCCTCCTCCCAACAGGACCACGTCGCCCGACAATTCTGACAGCGACAATAGTCCCGCCCCGAAGCTCcaggaggaaggaggaaacGTGCAGGACAAGAAGAAGAGCGACACGTTACGTAAACTCTTCTACTCGAACAAGGGCGGAGCAAAGGGCGGAGGAAAGGGTGCAAAAGGTGGCGGCAAGGTCGGCGGCAAGTGTGGAATCTACGTCGAGGAATACACGTCAGCCTCGATCCTGACGGGCGGCGAGAGTCCTTACAAGAGGCCCTCCTCGCAGATGTCGATTCCGCCGTTGAGATACGTAAACGGTATTCCGAGTATTATGTGCCGACTGGATCTCAGTCGACTCTCCCACGTGCCCCAACCATCGCGCGGCCAGGAATTGAGGCAGCACACCGAGCTCCCGGACACCAGGCCGTCCTCGAGGCCGTCCTCGAGGCAGGCTGCCACTCTGGCCCCGCCACGACCGTCGACCCCCGAGGAGGGCGAAATTCTCGAGACTCCTTTGCCTTCGAAGATACGGACTCACAGTGAGAATAGCAACGCCCTCGAGGGCGAGATACCCCTAAAAATTCGGGGCATCAAAGCTGATCCGATCTCCTCGGACACGAAGAACTCGATAGGTGGAATCGGTGCTCACAGTGGCGGCGGTAGTAGTTTCGTTGGTCCTGTTTCTAGTATAGCTAGTGCCAGTACTCTGAACGTGAGTGCCAGTGCCAGTGCCAGTTCCAGTGGTACCAGTGGTGCCAACGGCAGCAGCACCGGCGCCACTGCCAGTAGCAGTACTGTCGGCGGCGGTAACAGTGGAAGTGCGCGCAAACGAAAACGCAATCTGAGTTGTAGTTCTGTGTCCAGCTTGAGTACCGTTTGTTCCGTGGACACGAAGGCGAAACACGGTTCCTCCGAGCacaaggagaaaaagaagaggaaacggAAGCACGCCGATGCCGAATCCCTCACACCGAGGCCTTCTTCCAGTCAGAGTGACGTTCAGCCTACGAATCACGAGCGGGAAGACAATGCGGACACCAGCCTCCTcccaccgccgccgccacctcatcgtatttattattcttacttcAACCCGCAGAACGAGATTGTCGAGGACCAGGATAGGGACCAGCATCAGTACCTGACGGAAGCTAAACGACTAAAACATAAGGCCGACGAAGAGTGCGACTTGACGGCCCAAGGAATGCTCTATCTCGAAGCTGTGCTCTACTTCCTGTTGACCGGCCACGCGATGGAATCCGATCCCTTGACCGAGCGGGCCTCCTTCACCATGTACAAAGACACTTTGAGTCTTATCAAGTACATCTCCTCCAAGTTCAAGAGTCAACAGAACAATTCCCCCGAGAGCAGTATACACAATAAGTTGGCTATTCTGAGcCTGTGGTGCCAGTCCCTCATATACTTGAAGCTCTTCAAGATGCGCAAACACGAAGTCAAAGATTATCAAAAGCTGCTGGCTGATTATTATCAAAAGCTAACTCAGGCATCTTTCGTCCAGCCCGAAGGACAGGGGACGCCGTCGCCTCTGTCTCCGACTCCCTCGCCAGCTGGCTCTGTTGGTTCGGTCGGAAGTCAAAGCTCCGGTTACAGCAGCGGCGAGCTGGCTAATCGAGGCGCAGCTGGACAACCTCAGGGTCCTCCCTGCTTGAACGTACCCCTCAGCGTGCATCACGCAATGCAGAAGCAAAATCATCACTTTGGTCTGTTGATGAACTGCCACGAGCTCTGGGACCAAGCAAACGCTCTGGTCACGGATAAGCACAGAGATTTCTTCATCGAGCTGGACGAAAGGATAGGCCCGCTCACGCTGAAGAGCTCGCTGCGGGATTTAGTTCGCTACGTTCAGGCTGGGATAAAGAAGTTACGAGCCCTCTGA
Protein Sequence
MIRENRDQVNPDAQDRATQQIQSKLGNYSLVKHFVLDDSKRLIGIEGVPASPAPASASALSRTSSSSGTTSRSSPSAQEFKKPGGPRTSSSGSSSHASQRGGFVKPADGKPPYSGRGSYSGQPVKHGGSSNDHRSHGLLPAKGPPPNLSSSSSTTTTTSSSSSSSTSSISSSSTSANLSGNANFDGAAGNVSAGSTGSTGSTGSRIHSVAGRLPRLPLDSGTNSRHGTTENSADLENILKEMMMPPTPLTAIAQTPRKELESKFTFNPVLAKLTEVPPGEAAKPQRERHPSNRLSADLERDLSLSEDSEDEEGTKGASPRASRNARSPDLTVDLSTPLIPAMTPAPPPLAPMSPMGMSPVGPLSSPRPLSPPRGSSPTKETSAMGALSPSPVPPMPQSPLEKSEKLSELSPLPTDQRPPSPPVEAMHQSSVSASSSSDSGSDSGSDSSDDSEDEVAQPPPKGPSTPPSVSPSAPAEEAPPAVEESKLRWNLSSFFTKPPPQQGDQNAENKSSQDDVRGDGSPSAVSSETRSHHRDAGHSGHSGHSGHTGHDWKLDEALKRTHNSAMLSLLSDSDHHSESDKRQSGIEEARQPTEKTKPPDAKKRGRPRKPTKSPKSHRNFDDSGGKNKRSSRTRVNNSPKKKPISKPTVSTSEDASDAQSQDGSSDSDSERPSPLRHSTGSPVSRSLSDKCRPRLSVSSSEDEGPPSKHNVPEDVSWTRLSIKRNKLAEQSAKKAEKKKASTKTKSRRSRPRLPSAPAGPSDSDSETEAAPINTRIQVARVPPRPRPPPNRTTSPDNSDSDNSPAPKLQEEGGNVQDKKKSDTLRKLFYSNKGGAKGGGKGAKGGGKVGGKCGIYVEEYTSASILTGGESPYKRPSSQMSIPPLRYVNGIPSIMCRLDLSRLSHVPQPSRGQELRQHTELPDTRPSSRPSSRQAATLAPPRPSTPEEGEILETPLPSKIRTHSENSNALEGEIPLKIRGIKADPISSDTKNSIGGIGAHSGGGSSFVGPVSSIASASTLNVSASASASSSGTSGANGSSTGATASSSTVGGGNSGSARKRKRNLSCSSVSSLSTVCSVDTKAKHGSSEHKEKKKRKRKHADAESLTPRPSSSQSDVQPTNHEREDNADTSLLPPPPPPHRIYYSYFNPQNEIVEDQDRDQHQYLTEAKRLKHKADEECDLTAQGMLYLEAVLYFLLTGHAMESDPLTERASFTMYKDTLSLIKYISSKFKSQQNNSPESSIHNKLAILSLWCQSLIYLKLFKMRKHEVKDYQKLLADYYQKLTQASFVQPEGQGTPSPLSPTPSPAGSVGSVGSQSSGYSSGELANRGAAGQPQGPPCLNVPLSVHHAMQKQNHHFGLLMNCHELWDQANALVTDKHRDFFIELDERIGPLTLKSSLRDLVRYVQAGIKKLRAL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2