Basic Information

Gene Symbol
lilli
Assembly
GCA_000341935.1
Location
NW:434376-473267[+]

Transcription Factor Domain

TF Family
AF-4
Domain
AF-4 domain
PFAM
PF05110
TF Group
Unclassified Structure
Description
This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 8 0.62 6.7e+03 -4.8 1.1 4 24 7 27 6 31 0.78
2 8 6.4e-05 0.69 8.4 18.2 25 214 55 235 48 261 0.49
3 8 6.6e-10 7.1e-06 24.8 1.5 341 444 284 384 252 393 0.77
4 8 0.14 1.5e+03 -2.6 25.8 443 499 470 524 454 553 0.56
5 8 1 1.1e+04 -9.3 16.5 127 242 564 672 532 696 0.40
6 8 0.93 1e+04 -5.4 15.6 456 501 693 738 673 745 0.54
7 8 0.7 7.6e+03 -5.0 8.8 441 502 782 842 747 848 0.50
8 8 0.018 2e+02 0.2 9.3 119 193 1094 1171 1057 1234 0.39

Sequence Information

Coding Sequence
ATGAAAAAGCCACGCGTGGACCGGGACCGTCTTCGGGAACGGGAACGACAGATCCGAGCGGCGATGTCGGTCCAGGCGGAGCAAGCGGCTGCTGGAGGAGGTCCTGACAGCCGTCACGGTCACCGTCATCACGGGCATCATCATGGACACCATCATCATTCGAATCCTCTTGCAGCCACCGCTCCGCTCTTCCGTGCTCCCGTGAGGGTTAATCCCGACGCCCAGGATCGCGCCACTCAGCAAATACAATCGAAGCTGGGCAACTACTCGCTGGTGAAGCACTTTGTACTCGACGACTCGAAGAGGCTCATCGGCATCGAGGGCGTCCCTGCGAGTCCGGCGCCGGCCTCAGCCTCCGGCCTCAGGACAAGTTCAAGTTCAGGGACGACCTCGAGAAGCTCACCGTCCGCCCAGGAATTCAAGAAACCTGGCGGTCCACGCACCGGCCCCAGCGGCTCCAGCGGCTCCAGCGGCTCCAGCGGGTCGAGTAGTCACGCTTCTCAGCGCGGTGGGTTCGTCAAACCGGCTGACGGGAAACCACCCTACAGTGGCAGGGGCAGCTACTCGGGACAACCCGTTAAACACGGCGGCAGCAGTAACGATCATCGCAGCCATGGGCTTCTTCCCGCCAAGGGTCCTCCTCCTAattcatcctcctcctcgtcctcctccacCACGTCAAGTATCTCCTCTTCGTCCGGCTCAGCCAATCTCAGTGGAAACGCAAACTTCGACGGCGCCGCTGGAAACGTCAGCGCCGGAAGCACCGGAAGTACCGGAAGCAGGATACACTCGGTGGCTGGTCGACTGCCCAGGCTGCCTCTGGATAACGGAACGAATAGCCGGCACGGAGCTACCGAAAATTCTGCCGACCTTGAAAATATCCTGAAAGAGATGATGATGCCGCCGACTCCGCTGACGGCGATCGCACAGACCCCGAGGAAAGAACTGGAGTCAAAGTTCACTTTCAATCCTGTACTCGCCAAGcTGACCGAAGTCCCACCTGGCGAAGCTGCGAAGCCTCAAAGAGAGAGGCACCCGTCCAACAGGCTGTCTGCGGACTTGGAGCGCGACCTGAGCCTTTCCGAGGACAGCGAGGATGAGGAGGGAGCCAAGGTTGCGTCACCGAGAGCCTCGAGGAACGCGAGAAGTCCGGACCTTATGGTCGACCTTTCGACGCCGCTGATACCGGCCATGACACCCGCTCCACCACCTCTAGCTCCTATGTCGCCGATGGGAATGTCGCCCGTTGGTCCTCTCTCGTCCCCGAGACCTCTGAGTCCTCCTCGAGTATCCTCCCCGACGAAGGAACCAAGCGCGACGGGCGCACTCTCGCCGTCACCGGTGCCGCCAATGCCACAGAGTCCTCTCGACAAGTCAGAAAAGCTCTCGGAACTTTCACCCTTACCGACGGACCAGAGGCCGCCGAGTCCTCCCGTGGAAGCGATGCACCAGAGTTCAGTTAGCGCAAGTTCCAGCTCCGATTCCGGATCGGACTCTGGCTCGGATAGCAGCGACGACTCTGAGGACGAGGTAGCACAACCTCCGCCTAAGGGACCATCAACGCCGCCTTCGGTGTCTCCGTCGGCACCTGCCGAGGAAGCTCCGCCAGCCGTCGAGGAATCGAAACTCCGCTGGAACCTCAGTTCGTTTTTCACGAAACCTCCGCCGCAGCAAGGCGATCAGAATgctgaaaataaatcttcaCAGGACGATGTGCGAGGAGACGGATCACCGAGTGCTGTGTCCTCGGAAACGAGATCTCATCATCGGGATGCTGGACACTCTGGACATTCGGGTCACACGGGGCACGATTGGAAACTCGATGAAGCTCTCAAGAGAACGCACAATTCGGCTATGCTGAGTCTCTTGAGTGACAGCGATCATCATTCCGAATCTGATAAGAGGCAGAGCGTCATCGAGGAGGCTCGTCAACAGACGGAGAAGATTAAGCCTCCGGATGCCAAGAAGAGAGGACGACCGCGTAAACCTACCAAGAGTCCAAAAAGCCATCGGAACTTTGACGACGGTGGTGGAAAGAACAAACGAAGCAGCAGGACGCGCATTAATAATAGTCCAAAAAAGAAGCCGATCTCAAAGCCGACGGTTTCTACTAGCGAGGACGCTAGCGATGCTCAATCGCAGGATGCTTCCAGCGATTCCGACAGCGAGCGTCCAAGTCCACTGAGACATTCAACAGCCTCCCCAGTGTCCCGGAGTGTCAGTGACAAGTGTCGGCCACGGCTGAGTGTCTCCTCGAGCGAGGACGAGGGACCTCCGAGCAAGCACAATGTCCCGGAGGATGTTTCTTGGACGAGGTTGTCGATTAAGAGAAATAAGCTCGCTGAACAGTCGGCAAAGAAggccgagaaaaagaaagcttCGACGAAAACAAAATCCAGGAGGTCGAGACCAAGACTTCCTAGTGCACCTGCCGGTCCCTCGGATTCCGACAGCGAGACCGAAGCGGCCCCAATTAATACTCGTATTCAGGTCGCAAGGGTGCCACCCAGGCCAAGACCTCCTCCCAACAGGACCACGTCACCCGACAATTCTGATAGCGACAATAGTCCAGCCCCGAAGCTCCAGGAGGAAGGAGGAAATGTACAGGACAAGAAGAAGAGTGATACGTTGCGTAAACTCTTTTACGTGAACAAGGGCGGAGCAAAGTGTGGAGGGAAGGGTGCAAAAGGTGGTGGCAAAGTCGGCGGGAAATGCGGAATCTACGTGGAGGAATACACATCAGCTTCGATCCTTACGGGCGGCGAGAGTCCGTACAAGAGGCCCTCCTCGCAGATGTCGATTCCGCCGTTAAGATACGTAAATGGTATTCCGAGTATTATGTGCCGACTGGATCTCAGTCGACTCTCCCACGTGCCCCAGCCATCGCGCGGTCAAGAATTGAGGCAACACACTGAGCTGCCGGACACCAGGCCGTCCTCGAGGCAGGCTGCCATTCTGGCCCCGCCACGACCATCAACCCCTGAGGAGGGCGAAATTGTCGACACTCCTCTGCCTTCGAAAATACGGACTCATAGTGAGAATAGTAATGCCCTTGAGGGCGAGATTCCCGTTAAAATTCGGGGCATTAAAGCCGAACCGATCTCGGACACGAAGAACTTGTTAGGTGGAATCGGTGCTCACAGTGGCGGCGGTAGTGGTTTCGTTGGTCCTGTTTCTGGTATAGCTAGTGCTAGTACTCTTAACGGAAATCCCAGTGCCAGTGCCAGTGGTACCAGTGGTGCTAATGGCAGCAGTACTGGTGCTACTGCCAGTAGCAGTACTGTCGGCGGCGGTAACAGTGGAAGTGCGCGCAAACGGAAACGCAATCTGAGTTGTAGTTCTGTGTCTAGCTTGAGTACCGTATGTTCCGTGGACTCGAAGGCGAAACAGGGTTCCTCCGAGcacaaggagaaaaagaagaggaaacgGAAGCATGCCGATGCCGAATCCCTCACGCCGAGGCCTTCTTCCAGTCAGAGTGACGTTCAGCCTACGAATCACGAGCGGGAAGACAATGCGGACACGAGCCTTCTtccgccaccgccgccacctcaccgtatttattattcttacttCAACCCGCAGAACGAGATTGTCGAGGACCAGGATAGGGACCAGCATCAGTACCTGACGGAAGCTAAACGACTAAAACATAAGGCCGACGAGGAGTGCGACCTGACGGCCCAAGGAATGCTTTATCTCGAGGCTGTACTCTACTTCCTGTTGACCGGCCACGCGATGGAATCCGATCCGTTGACCGAGCGGGCCTCCTTCACCATGTATAAAGACACTTTAAGTCTTATCAAGTATATCTCCTCCAAGTTCAAAAGTCAACAGAACAATTCCCCCGAGAGCAGTATACACAATAAGTTGGCTATTTTGAGcCTATGGTGCCAGTCCCTCATATACTTGAAGCTCTTCAAGATGCGCAAACATGAAGTCAAAGATTATCAAAAACTCCTAGCTGATTATTATCAAAAGGTAATTCATCCTGCTTTAAGAAAAGTGCAAAAAGGATTGAGCATCACTCTTGTCTTTGACTTACAGCTAACTCAGGCATCTTTCGTCCAGCCCGAAGGACAAGGGACGCCATCGCCTTTGTCCCCGACTCCCTCGCCAGCTGGCTCTGTTGGTTCTGTCGGAAGTCAAAGCTCTGGCTACAGCAGCGGCGAGCTGGCTAATCGAGGTGCAGCTGGACAACCTCAGGGTCCTCCTTGCTTAAACGTACCCCTCAGCGTGCACCACGCAATGCAGAAGCAAAATCATCACTTTGGTCTGTTGATGAATTGCCACGAACTCTGGGACCAAGCTAATGCTCTGGTCACGGATAAGCATAGAGATTTCTTTATCGAGCTGGACGAAAGGATAGGTCCGCTCACATTGAAGAGCTCGCTGCGGGATTTAGTTCGCTACGTTCAGGCTGGGATAAAGAAGTTGCGAGCCCTCTGA
Protein Sequence
MKKPRVDRDRLRERERQIRAAMSVQAEQAAAGGGPDSRHGHRHHGHHHGHHHHSNPLAATAPLFRAPVRVNPDAQDRATQQIQSKLGNYSLVKHFVLDDSKRLIGIEGVPASPAPASASGLRTSSSSGTTSRSSPSAQEFKKPGGPRTGPSGSSGSSGSSGSSSHASQRGGFVKPADGKPPYSGRGSYSGQPVKHGGSSNDHRSHGLLPAKGPPPNSSSSSSSSTTSSISSSSGSANLSGNANFDGAAGNVSAGSTGSTGSRIHSVAGRLPRLPLDNGTNSRHGATENSADLENILKEMMMPPTPLTAIAQTPRKELESKFTFNPVLAKLTEVPPGEAAKPQRERHPSNRLSADLERDLSLSEDSEDEEGAKVASPRASRNARSPDLMVDLSTPLIPAMTPAPPPLAPMSPMGMSPVGPLSSPRPLSPPRVSSPTKEPSATGALSPSPVPPMPQSPLDKSEKLSELSPLPTDQRPPSPPVEAMHQSSVSASSSSDSGSDSGSDSSDDSEDEVAQPPPKGPSTPPSVSPSAPAEEAPPAVEESKLRWNLSSFFTKPPPQQGDQNAENKSSQDDVRGDGSPSAVSSETRSHHRDAGHSGHSGHTGHDWKLDEALKRTHNSAMLSLLSDSDHHSESDKRQSVIEEARQQTEKIKPPDAKKRGRPRKPTKSPKSHRNFDDGGGKNKRSSRTRINNSPKKKPISKPTVSTSEDASDAQSQDASSDSDSERPSPLRHSTASPVSRSVSDKCRPRLSVSSSEDEGPPSKHNVPEDVSWTRLSIKRNKLAEQSAKKAEKKKASTKTKSRRSRPRLPSAPAGPSDSDSETEAAPINTRIQVARVPPRPRPPPNRTTSPDNSDSDNSPAPKLQEEGGNVQDKKKSDTLRKLFYVNKGGAKCGGKGAKGGGKVGGKCGIYVEEYTSASILTGGESPYKRPSSQMSIPPLRYVNGIPSIMCRLDLSRLSHVPQPSRGQELRQHTELPDTRPSSRQAAILAPPRPSTPEEGEIVDTPLPSKIRTHSENSNALEGEIPVKIRGIKAEPISDTKNLLGGIGAHSGGGSGFVGPVSGIASASTLNGNPSASASGTSGANGSSTGATASSSTVGGGNSGSARKRKRNLSCSSVSSLSTVCSVDSKAKQGSSEHKEKKKRKRKHADAESLTPRPSSSQSDVQPTNHEREDNADTSLLPPPPPPHRIYYSYFNPQNEIVEDQDRDQHQYLTEAKRLKHKADEECDLTAQGMLYLEAVLYFLLTGHAMESDPLTERASFTMYKDTLSLIKYISSKFKSQQNNSPESSIHNKLAILSLWCQSLIYLKLFKMRKHEVKDYQKLLADYYQKVIHPALRKVQKGLSITLVFDLQLTQASFVQPEGQGTPSPLSPTPSPAGSVGSVGSQSSGYSSGELANRGAAGQPQGPPCLNVPLSVHHAMQKQNHHFGLLMNCHELWDQANALVTDKHRDFFIELDERIGPLTLKSSLRDLVRYVQAGIKKLRAL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00295238;
90% Identity
iTF_00253557;
80% Identity
-