Basic Information

Insect: Catoptria pinella
Gene Symbol: -
Assembly: GCA_963556745.1
Location: OY750767.1:4685962-4701934[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 8.3e-05 0.006 17.5 2.2 1 23 414 436 414 436 0.97

2 20 0.0013 0.096 13.7 0.6 1 21 442 462 442 464 0.94

3 20 2.2e-05 0.0016 19.3 5.6 1 23 483 505 483 505 0.98

4 20 0.0001 0.0073 17.2 4.1 1 23 511 533 511 533 0.99

5 20 3.7e-05 0.0027 18.6 5.3 1 23 539 561 539 561 0.97

6 20 7.4e-06 0.00053 20.8 8.3 1 23 567 589 567 589 0.97

7 20 5.5e-07 4e-05 24.3 3.1 1 23 595 617 595 617 0.98

8 20 0.00011 0.0076 17.1 6.7 1 23 623 645 623 645 0.97

9 20 0.0001 0.0076 17.2 6.5 1 23 651 673 651 673 0.97

10 20 5.1e-07 3.7e-05 24.4 1.9 1 23 679 701 679 701 0.98

11 20 5.2e-05 0.0037 18.1 7.9 1 23 707 729 707 729 0.98

12 20 1.9e-05 0.0013 19.5 7.8 1 23 735 757 735 757 0.98

13 20 6.6e-06 0.00048 20.9 4.3 1 23 763 785 763 785 0.98

14 20 1.5e-05 0.001 19.8 4.7 1 23 791 813 791 813 0.98

15 20 2.8e-06 0.0002 22.1 4.6 1 23 819 841 819 841 0.97

16 20 2.6e-05 0.0019 19.1 6.1 1 23 847 869 847 869 0.98

17 20 0.00049 0.036 15.0 8.7 1 23 875 897 875 897 0.97

18 20 2.6e-06 0.00019 22.2 4.1 1 23 903 925 903 925 0.96

19 20 0.00047 0.034 15.1 0.2 1 23 932 954 932 954 0.97

20 20 0.32 23 6.2 5.0 1 23 965 987 965 987 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	8.3e-05	0.006	17.5	2.2	1	23	414	436	414	436	0.97
2	20	0.0013	0.096	13.7	0.6	1	21	442	462	442	464	0.94
3	20	2.2e-05	0.0016	19.3	5.6	1	23	483	505	483	505	0.98
4	20	0.0001	0.0073	17.2	4.1	1	23	511	533	511	533	0.99
5	20	3.7e-05	0.0027	18.6	5.3	1	23	539	561	539	561	0.97
6	20	7.4e-06	0.00053	20.8	8.3	1	23	567	589	567	589	0.97
7	20	5.5e-07	4e-05	24.3	3.1	1	23	595	617	595	617	0.98
8	20	0.00011	0.0076	17.1	6.7	1	23	623	645	623	645	0.97
9	20	0.0001	0.0076	17.2	6.5	1	23	651	673	651	673	0.97
10	20	5.1e-07	3.7e-05	24.4	1.9	1	23	679	701	679	701	0.98
11	20	5.2e-05	0.0037	18.1	7.9	1	23	707	729	707	729	0.98
12	20	1.9e-05	0.0013	19.5	7.8	1	23	735	757	735	757	0.98
13	20	6.6e-06	0.00048	20.9	4.3	1	23	763	785	763	785	0.98
14	20	1.5e-05	0.001	19.8	4.7	1	23	791	813	791	813	0.98
15	20	2.8e-06	0.0002	22.1	4.6	1	23	819	841	819	841	0.97
16	20	2.6e-05	0.0019	19.1	6.1	1	23	847	869	847	869	0.98
17	20	0.00049	0.036	15.0	8.7	1	23	875	897	875	897	0.97
18	20	2.6e-06	0.00019	22.2	4.1	1	23	903	925	903	925	0.96
19	20	0.00047	0.034	15.1	0.2	1	23	932	954	932	954	0.97
20	20	0.32	23	6.2	5.0	1	23	965	987	965	987	0.98

Sequence Information

Coding Sequence: ATGAATCCAGAACACCACAATATCAATACGGGTGGTGGCCCACCACCTGGAAGTTCTGAGTCTCAGAACCAAAGAGTGCAAAGTACGCAACAACAACAGCAGGGCAATAATTTGCCCGCTACAACCTCTGCGACAGATCTTCGGGTCAATTCCGCGGCGGTGAACGTTGCTTTGTCTAGCGTGGCCAAATATTGGGTGTTTACCAATCTTTTTCCTGGACCTATACCACAAGTTTCTGTTTATGGTCTTCCTACGGGTGCTAGAATAGAAAATGGAAAGCCTGTTCAGGACCTCGGCCAACATGCTAGCATACTCAATGGTGACCCCAACATCATATTGGGGCATCATGGCGGCCAATCGCAAGTCACAGTTTCAGCTCCGGGTGGGCAACAAATACCGGTTTCACAGATCATAGCTACTCAATCTGGACAAACACatgaAGCATTGGTGGCACACACTCAACAGCAGGAGCTTGCTGTACAGCAAGCATCGGGCACCACTCAGGTCACAGTGAGCCCAGGCCAGCATCAGCAGGTACCCAATAATCGGGTCGAGTTTGTACAACACCATAACATTGATATGGGGCATCATTCACATCAACACTTAATGCAGCAACAAGTAATGGCCACTGCCCGCCCAGAACACTCAAATCAACAGATCCAATTGACTGTGAGTGAAGACGGCATCGTTACGGTGGTAGAACCGGGGGGCAAGTTGGTTGACAAGGAGGAGTTGCATGAAGCGATAAAGATGCCTTCAGACCACACGCTTACTGTCCATCAGTTACAGCAGATTGTTGGACAGCAGGTCATAGACAGCGTTGTTCGTATAGAGCAGGCTACAGGCGAGCCCGCCAATATCTTGGTGACGCACAACCCCGATGGCACTACTTCCATAGAAGCCAGCGCTGGAGATCAACTCATAGTCAAGGATGAGAAGAACGCTGGCAAACTAGAGGCCACGCAGTATGCTGAGATTAAAGACATAAAGGGCATAGACTTGAAGAGTGTGGGAGCCATGGGAATGGAAGGTGCAGTAGTCAAAATCTCAGGTGCCTCAGAGCACGATCTTCATGCCATGTACAAAGTAAATGTAGAAGATTTATCACAGCTGCTAGCTTACCATGAAGTGTTTGGAAAACTTAATGCTGAAGGACAACAGCAAGCAAAGACAGTGGAAGTAGAAGTGGAAGCAGGAACAAGCACAGCAATGTCTGAAGCAGAATCATCACCTGGCCATCATTCTTGTGATATCTgtggaaaaatatttcagttcCGTTATCAACTCATTGTACATAGACGATACCACGGCGAAAGCAAGCCATTCACATGTCAAGTTTGTGGTTCAGCTTTTGCCAACCCTGTTGAACTAACAAAACACGGAAGATGTCATCTCGCTGGCGATCCAGCGGAGAGGAACAACAAACGAATGACCCAAGACAAGCCGTACGCCTGCACCACCTGCCACAAGACCTTCTCTCGGAAGGAACATCTCGACAACCACGTGCGCAGTCATACCGGAGAAACTCCGTATAGATGTGAATTCTGCGCAAAGACGTTCACCCGCAAGGAGCACATGGTGAACCACGTGCGCAAGCACACAGGCGAGACGCCGCACCGCTGCGAGATCTGCAAGAAGAGCTTCACCAGGAAGGAACACTTCATGAACCACGTCATGTGGCATACCGGTGAAACTCCGCACCATTGTCAAATATGTGGCAAGAAGTATACTAGGAAGGAGCATTTAACCAACCATATGAGGTCGCACACTAATGATACCCCGTTTCGTTGCGATCTATGCGGCAAGTCGTTCACAAGAAAGGAACACTTCACCAATCACATTATGTGGCATACGGGTGAAACGCCCCATCGATGCGACTTCTGTTCAAAGACATTCACCCGGAAGGAGCATTTGTTGAACCACGTCCGCCAGCACACGGGCGAGTCGCCTCACCGGTGCAACTTCTGCTCCAAGTCGTTCACCAGGAGAGAACACCTCGTGAACCACGTCCGCCAACACACGGGAGAAACGCCTTTCCAGTGCGGTTACTGCCCAAAGGCATTTACTAGAAAGGACCATCTCGTGAACCACGTCCGCCAGCACACGGGCGAGTCGCCGCACAAGTGTTCGTTCTGCACGAAGTCGTTCACGCGCAAGGAGCACCTCACGAACCACGTGCGCCAACACACGGGCGAGTCGCCGCACCGCTGCACCTTCTGCTCGAAATCGTTCACTAGGAAGGAACACCTCACCAACCATATCAGACAACATACGGGAGAAACGCCGCACAAATGCACGTACTGTCCGCGGGCGTTCGCGCGCAAGGAACATCTCACGAACCACGTGCGCCAACACACCGGGGATATGCCCTTCTCCTGCACTTTCTGCACCAAGTCTTTCAACCGGAAGGAGCATCTTGTTAACCATATCAGGCAACATACGGGCGAGACGCCGTTCAAGTGCACGTACTGCTCCAAGTCTTTCTCGCGCAAAGAACACCTGACGAATCACGTGCTCCTGCACACGGGCGAGACGCCACACAAGTGTGCCTTCTGCACCAAGACCTTCTCCAGGAAGGAACACTTGACCAACCACGTCAGAATACACACTGGTGAATCTCCTCATCGCTGCGAGTTCTGTCAAAAGACGTTCACACGCAAGGAGCACCTCACGAACCACTTCAAACAACACACTGGCGATACGCCGCACGCGTGTAAGATCTGCTCCAAACCGTTCACTAGGAAAGAACATCTGGTGACGCATATGAGATCACACAGTTGCGGACAGAGACCATTCAGTTGCGGAGAGTGCGGCAAATCGTTCCCGCTGAAAGGCAACCTGATATTCCATGAACGATCGCACAATAAAGCCAGTGGCGGTACTACGAGGCAGTATCGATGCGATATCTGCTCCAAGGACTTCCTATGTAAAGGTCATTTAGTGTCTCATCGGAGAACACACACGGAAACTGGCGATGCCGCGCCTAGCGGCGAAGCTCCGGCAGAAACCGAGGACTGCGGAGACTGCAATAAATGCGAGAAAATCGACACGGAGCGACCAGAGAGAAAGCATGATATCAGAGCGACCACGGAAAGTAGACCGGCAGATAATAATGTCGCACAAAATCAACAAAGCAACCCAACTGTGATGCAAATATCGAGTCAGGAGGTGCGCACAGCAGCGACGAGCGCAACGAGCGTTCCCACGTTCACCGTCAGCACTCAACACCACGCCGGCGCCGCGCTCGCGCACCACCCCGTCACCGTCAACTACTAG
Protein Sequence: MNPEHHNINTGGGPPPGSSESQNQRVQSTQQQQQGNNLPATTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTGARIENGKPVQDLGQHASILNGDPNIILGHHGGQSQVTVSAPGGQQIPVSQIIATQSGQTHEALVAHTQQQELAVQQASGTTQVTVSPGQHQQVPNNRVEFVQHHNIDMGHHSHQHLMQQQVMATARPEHSNQQIQLTVSEDGIVTVVEPGGKLVDKEELHEAIKMPSDHTLTVHQLQQIVGQQVIDSVVRIEQATGEPANILVTHNPDGTTSIEASAGDQLIVKDEKNAGKLEATQYAEIKDIKGIDLKSVGAMGMEGAVVKISGASEHDLHAMYKVNVEDLSQLLAYHEVFGKLNAEGQQQAKTVEVEVEAGTSTAMSEAESSPGHHSCDICGKIFQFRYQLIVHRRYHGESKPFTCQVCGSAFANPVELTKHGRCHLAGDPAERNNKRMTQDKPYACTTCHKTFSRKEHLDNHVRSHTGETPYRCEFCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRKEHLTNHMRSHTNDTPFRCDLCGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCTFCSKSFTRKEHLTNHIRQHTGETPHKCTYCPRAFARKEHLTNHVRQHTGDMPFSCTFCTKSFNRKEHLVNHIRQHTGETPFKCTYCSKSFSRKEHLTNHVLLHTGETPHKCAFCTKTFSRKEHLTNHVRIHTGESPHRCEFCQKTFTRKEHLTNHFKQHTGDTPHACKICSKPFTRKEHLVTHMRSHSCGQRPFSCGECGKSFPLKGNLIFHERSHNKASGGTTRQYRCDICSKDFLCKGHLVSHRRTHTETGDAAPSGEAPAETEDCGDCNKCEKIDTERPERKHDIRATTESRPADNNVAQNQQSNPTVMQISSQEVRTAATSATSVPTFTVSTQHHAGAALAHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01071806;
90% Identity: iTF_00035925; iTF_00382917; iTF_00319114; iTF_00035007;
80% Identity: -