Cfel037384.1
Basic Information
- Insect
- Camponotus fellah
- Gene Symbol
- -
- Assembly
- GCA_030586385.1
- Location
- JAPIVC010000779.1:3198871-3202007[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.9e-13 1.6e-09 38.8 0.4 3 38 114 148 113 153 0.91 2 2 4.4 2.5e+04 -3.4 0.0 30 38 176 184 176 186 0.84
Sequence Information
- Coding Sequence
- ATGAAATGTCTGAAAATGTCAATGTTCATCGCATGCTGTTCGCTCGTTTGGGAGGACTATCAAGTACTCGGCACAAGCACGGCCAACAGGTCTAGCAGTTACGTCGAGCGCAAATTTAGAGTCAAACACATGGATCACATTGGTAGGTACAAGTGCTCCAAGTGCGCCAAGTCGTATCGATGGAAGCATCACCTTGTGGAGCACGTCAAGGCCTCATGCGGCCAGAAGAAGGCAGAGTGCTGTCCGTATTGCAGTTATAAGAGCAATCAATCATTTGCTTACGAGACCTGTTTACGAAACACGAGATATATGATGAAGCAAAGATCTAAACGCAATTCGGAACAGGTGACGAGAGCCATTGAAGCTGTTGCCGGTGGGATGTCCTTGAGGAAGGCTGCGAAGATGTACTCCATATCTAAATCAGTTCTACATCGATACAGCAAGCATGATGCGCACGCGGCAGGCTACCTGAATTGCCAGAGGGTTACTTACCCGTGTAAGAACTGCGGCAAGAAATACAGCTATTACTCCAGCCTGGCTAGGCATCTGAAGCACGAATGCGGCGTGGAGCCCAAATTTCACTGCCCTCTGTGTCCTTACAAAACGAAGCACAAATCGAGCCTGAACACTCACCTAAATGGCAGACACATGAAGCTACtgaacgaaaaatataatttacttagtAAAATGTCTTCGACAGACGCCGGAAACTGA
- Protein Sequence
- MKCLKMSMFIACCSLVWEDYQVLGTSTANRSSSYVERKFRVKHMDHIGRYKCSKCAKSYRWKHHLVEHVKASCGQKKAECCPYCSYKSNQSFAYETCLRNTRYMMKQRSKRNSEQVTRAIEAVAGGMSLRKAAKMYSISKSVLHRYSKHDAHAAGYLNCQRVTYPCKNCGKKYSYYSSLARHLKHECGVEPKFHCPLCPYKTKHKSSLNTHLNGRHMKLLNEKYNLLSKMSSTDAGN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00264641; iTF_00729641; iTF_00729217; iTF_00868687; iTF_01255170; iTF_00867314; iTF_00867794; iTF_00869236; iTF_01254715; iTF_01245142; iTF_00280784; iTF_00731095; iTF_01245561; iTF_00280542; iTF_00730655;
- 90% Identity
- iTF_00264641;
- 80% Identity
- iTF_00264641;