Lful014372.2
Basic Information
- Insect
- Lasius fuliginosus
- Gene Symbol
- Sry-delta
- Assembly
- GCA_949152495.1
- Location
- OX424446.1:13381496-13385515[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.1e-13 1.3e-09 38.7 0.2 3 38 124 158 122 161 0.91 2 2 9.2 2.1e+04 -3.5 0.0 30 38 186 194 186 196 0.84
Sequence Information
- Coding Sequence
- ATGTATTCTGAAAATGTCTCAATGTTCATCGCATGCTGCTTAGATGTAGATGTTTTAAGTTCGCTCGTTTGGGAGGACTATCAGGTACTCGGCACGAGCACGGCCAGCAGATCTAGTAGCGGTTACATCGAGCGCAAGTTCAGATTCAAACATATGGATCATATTGCGGGTAGGTACAAGTGCTCCAAGTGCGCCAAGTCATATCGATGGAAGCATCATCTCGTGGAGCACGTCAAGGCCTCCTGCGGCCAGAAGAAGGCAGAGTGCTGCCCGTACTGCAGTTACAAGAGCAATCGATCATTTGCTTACGAGACCCGTTTACGAAACACGAGATATACGATGAAGTCGCGAAGATCTAAACGCGATTCGGAACAGGTGACGAGAGCCGTCGAAGCTGTTGCCGGTGGGATGTCCTTGAGGAAGGCCGCGAAGATGTACTCTATATCCAAATCGGTTTTACATCGATACAGTAAACACGATGCGCGCGCGACGAGCTACTTGAACTGCCAGAGGGTTACTTACACGTGTAAGAACTGCGGCAAAATCTACAACTATTACTCCAGCCTGGCCAGGCATCTAAAGCACGAGTGCGGCGTGGAGCCCAAGTTTCTCTGCCCACTGTGCCCTTACAGAACGAAGCACAAGTCGAGCCTGAACACTCACCTAAATGGCAGGCACATGAAGCTGTTGAACGAATTCTACACTTCGCCCAACAGCAATAAGATGCCTTCAACGGACGCTGGGAATTGA
- Protein Sequence
- MYSENVSMFIACCLDVDVLSSLVWEDYQVLGTSTASRSSSGYIERKFRFKHMDHIAGRYKCSKCAKSYRWKHHLVEHVKASCGQKKAECCPYCSYKSNRSFAYETRLRNTRYTMKSRRSKRDSEQVTRAVEAVAGGMSLRKAAKMYSISKSVLHRYSKHDARATSYLNCQRVTYTCKNCGKIYNYYSSLARHLKHECGVEPKFLCPLCPYRTKHKSSLNTHLNGRHMKLLNEFYTSPNSNKMPSTDAGN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00264194;
- 90% Identity
- iTF_01254715;
- 80% Identity
- iTF_00867794;