Bany005357.1
Basic Information
- Insect
- Bicyclus anynana
- Gene Symbol
- -
- Assembly
- GCA_947172395.1
- Location
- OX359219.1:617657-623997[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.5e-11 1e-08 34.9 0.0 4 39 174 210 171 214 0.89 2 4 3.7e-11 2.5e-08 33.7 0.3 2 39 226 263 225 266 0.92 3 4 4.4e-15 3e-12 46.2 0.0 2 45 281 325 280 325 0.96 4 4 1.1e-17 7.5e-15 54.5 0.0 1 42 332 374 332 375 0.95
Sequence Information
- Coding Sequence
- ATGCCCGGGACAGAAAGCCTTCATGTGAAATGCGAGCTACCGTCTGACGAAGAGGAAACTAATTCACAAATAGCTACTTCCTTTGGGCGAGAGCTCTCTGACTACGTCTCTATTAAATTAGAACCGAGTTTACATACAGATGACAATGCATCCTCAACCCTTCTACATCATTTACGGTGTGTGCAAGGGTCGCTGGAGGAGATGGCGCCGGCGCCGCCCGCCCCCGCCGCGACCCCTGTCTGCGAGCAGCTGCCATCCACACACGACGCGTCCTTCGCGACGCTTGAGCCGGCCTCTTACGCAACCGATGTGGGTTCCTCACTGATTGACAGACACATCCAACTGATGTGTGCCAATGAGGTGGCCGATTCTTCCGACTTCGTGCCTCTGATGGCCGTCAAAGATGAACCCACGTCTGAAGGAGAGCAACAACACATGAGCGGCGAGGACACGAACGACTCTAGCGGCCCGCTGCAGGAGCTGGCAAGCCGCGGCAGTCCCAAGAGTTGGACGCAGCAGGACATGGACAAAGCGTTGGAGGCTTTGAGGAAACATCACATGAGTTTAACGAAAGCGTCAGCTACATACGGCATACCGTCTACAACCCTCTGGCAAAGGGCGCATCGGTTAGGTATCGACACTCCGAAAAAGGAAGGTGCTTCAAAATCCTGGAGTGAAGCAGACCTTCGTGGGGCGTTACATGCGCTGAGAGCTGGTGCTATATCTGCTAACAAGGCCAGTAAGGCTTATGGTATCCCCAGCAGCACACTGTACAAGATCGCTCGTCGCGAGGGCATCCGACTGGCGGCTCCCTTCAACGCGGCGCCCACGGCGTGGCGGCGCGCGGACCTGGAGCGCGCGCTGCAGGCCATACGATGCGGCGCCGCCTCCGTGCAGAGAGCGGCCACGCAGTTCGGCATACCCACTGGAACGTTGTATGGACGGTGTAAGCGTGAAGGCATCGAGTTATCACGCTCCAACCCCACGCCGTGGTCAGAAGACGCTATGGGCGAGGCTTTAGAGGCTGTCAGAGTCGGCCAAATGTCCATAAACCAAGCAGCGATCCACTTCAACTTACCATACTCGTCGCTGTACGGCCGCTTCAAGCGTTGCAAATACCAACCAGTGCAGAATCCACCTGTGCAACAAGACATGCCACCACACGACGTGGAGATGCAACAGGAGCCATACTTCCATCAGTCGCAGGAGATGCCCGGCGCTTACCTTAGCGACATGGACACGTCGCATATGCAATACGCAATGTATTATGCACAGTGCGATGTGTCCAGCTGA
- Protein Sequence
- MPGTESLHVKCELPSDEEETNSQIATSFGRELSDYVSIKLEPSLHTDDNASSTLLHHLRCVQGSLEEMAPAPPAPAATPVCEQLPSTHDASFATLEPASYATDVGSSLIDRHIQLMCANEVADSSDFVPLMAVKDEPTSEGEQQHMSGEDTNDSSGPLQELASRGSPKSWTQQDMDKALEALRKHHMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGASKSWSEADLRGALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWRRADLERALQAIRCGAASVQRAATQFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHFNLPYSSLYGRFKRCKYQPVQNPPVQQDMPPHDVEMQQEPYFHQSQEMPGAYLSDMDTSHMQYAMYYAQCDVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00953437; iTF_01151145; iTF_00801716; iTF_01021108; iTF_00954333; iTF_01091614;
- 90% Identity
- -
- 80% Identity
- -