Mhyp007288.1
Basic Information
- Insect
- Maniola hyperantus
- Gene Symbol
- -
- Assembly
- GCA_902806685.1
- Location
- NC:14192498-14208522[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.7e-11 1e-08 34.2 0.0 4 39 215 251 212 255 0.89 2 4 3e-11 1.8e-08 33.5 0.3 2 39 267 304 266 307 0.92 3 4 3.6e-15 2.2e-12 46.0 0.0 2 45 322 366 321 366 0.96 4 4 1.8e-18 1.1e-15 56.6 0.0 1 43 373 416 373 418 0.95
Sequence Information
- Coding Sequence
- ATGTTACGGTTTCTCGTATACGCTTCGAGAAGTTTGAAAGTCGATAAAAACTTTCTGAAACTTTACTTCGAAAGTTCACAAGTGGAAATTTTCAAGATGAAAAGTCGTAACATTATGGAAATGCCCGGATCAGAAAGGCTTCAAGTGAAATGCGAACTGCCATCTGACGAAGAAGAAAGTAATTCACAATTCGTTCATTCATTTGGTCATCAGCTCACATCAGAATACGTCCCTATTAAATTGGAACCAAACTCACAAGTAGACGATAATGCATCGTCGAATCTTTTGCATCATTTACAGTGTGTTGAAGGCGCGCTGGAAGAACTGGTACCGGCGCCAGCCGCGCCCGCTGCCACGCCTGTCTGTGAACAACTGCCTTCCACCAACGATGCCTCCTTCGCGACACTAGAACCGGCCTCATACGCTACTGCTGTGGGATCATCACTCATTGACAGGCATATACAAATGATGAGCACCACTGAAGTGGCTGATTCAGCGGACTTTGTACCTCTGATGGCCATCAAAGATGAACCCTCATCGGAAGGAGAGCAACAACATTTAAGCGGTGATGATACAAGCGATTCAAGCGGTCCACCGCACGAGTCCTTAAGTCGCGGCAGTCCTAAGAGCTGGACTCAACAGGACATGGAGAAAGCTTTAGAAGCTTTGAGGAAGCATAATATGAGTTTAACAAAAGCATCCGCAACCTACGGTATACCGTCTACGACCCTCTGGCAGAGGGCACATCGGCTAGGCATCGACACTCCGAAAAAAGAAGGCGCGTCTAAATCCTGGAGCGAGGCGGACTTGCGAGGGGCGTTGCACGCACTGAGAGCGGGTGCTATAAGTGCCAACAAAGCTAGCAAGGCTTATGGAATCCCTAGCAGTACTCTGTACAAGATAGCTCGTCGCGAAGGTATCCGCCTGGCAGCGCCTTTCAACGCCGCCCCAACTGCTTGGAGACGCGCGGACTTGGAGCGAGCTTTACAAGCTATTCGATGTGGTGCCGCTTCCGTGCAACGAGCCGCCACGCAGTTCGGAATACCCACAGGAACTCTGTATGGGCGATGCAAGCGAGAAGGCATCGAGCTGTCACGCTCTAACCCCACTCCGTGGTCAGAAGATGCTATGGGAGAAGCTCTGGAAGctgttagagtAGGTCAAATGTCCATAAACCAAGCAGCGATCCACTATAACCTGCCTTACTCATCTTTGTATGGACGCTTCAAACGCTGCAAATATCAATCTGTACAGAACCAACCAATCCAACAAGACATACCAATACACTCCGATACAGAAAACCAGCCACAAGACCTGTATTATCAACAGATGCCCCAAACCATGCTCACAGAGGATATACAAAGCCCCTATATAAACGATATGGAGACCTCGCATATTCAGTACGCACAGATGTACTACAATCAGTGCAATGTATCCAGCTGA
- Protein Sequence
- MLRFLVYASRSLKVDKNFLKLYFESSQVEIFKMKSRNIMEMPGSERLQVKCELPSDEEESNSQFVHSFGHQLTSEYVPIKLEPNSQVDDNASSNLLHHLQCVEGALEELVPAPAAPAATPVCEQLPSTNDASFATLEPASYATAVGSSLIDRHIQMMSTTEVADSADFVPLMAIKDEPSSEGEQQHLSGDDTSDSSGPPHESLSRGSPKSWTQQDMEKALEALRKHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGASKSWSEADLRGALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWRRADLERALQAIRCGAASVQRAATQFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRCKYQSVQNQPIQQDIPIHSDTENQPQDLYYQQMPQTMLTEDIQSPYINDMETSHIQYAQMYYNQCNVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00205043;
- 90% Identity
- iTF_00801716;
- 80% Identity
- -