Paeg004415.1
Basic Information
- Insect
- Pararge aegeria
- Gene Symbol
- -
- Assembly
- GCA_905163445.1
- Location
- NC:810009-853095[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 7.2e-12 9.6e-09 34.4 0.0 4 39 175 211 172 215 0.89 2 4 1.3e-11 1.7e-08 33.6 0.3 2 39 227 264 226 267 0.92 3 4 1.5e-15 2e-12 46.2 0.0 2 45 282 326 281 326 0.96 4 4 1.8e-18 2.4e-15 55.6 0.0 1 41 333 374 333 376 0.95
Sequence Information
- Coding Sequence
- ATGCCAGGATCAGAAAGCTTTCATGTGAAATGCGAACTGCCTTCCGACGAAGACGAAAGTAATTCACAATTCGCGAATTCGTTTAGTCATCAGCTCTCCTCAGACTACGTGCCTGTTAAATTGGAACCGAACTCACAAATAGATGACAATGCATCAACGAATCTTTTGCATCATTTTCagTGTGTGGAAGGCACGCTGGAAGAGCTAGCACCGGCGCCGGCGGGGCCCGCCGCCACGCCGGTCTGCGAACAGCTCCCATCCACACACGACGCGTCGTTTGCGACCCTCGAGCCTGCCTCGTACGCAGCAGTTGTGGGTTCATCACTGATCGACAGACACATAAAAATGATGAGTGCCAACGAAGTAGCCGATTCCGCTGACTTTGTGCCTCTAATGTCCATCAAAGATGAACCCACGTCTGAAGGAGAGCAGCAACACTTCAGTGGTGACGACAACAGTGACTCAAACGGTGCATTGCATGAGTCTGCAAGCCGAAGCAGTCCTAAAAGTTGGACGCAGCAGGATATGGAAAAAGCTTTGGAGGCCTTAAGAAAACACAACATGAGTTTAACAAAAGCTTCGGCAACCTACGGTATACCATCAACAACCCTCTGGCAAAGGGCACACCGGTTAGGTATCGACACTCCTAAAAAAGAAGGCGCTTCGAAGTCCTGGAGCGAAGCAGACCTCCGGGGTGCGTTGCACGCCCTAAGAGCTGGTGCTATTTCTGCCAACAAAGCCAGTAAAGCATATGGTATACCCAGCAGCACCCTGTACAAGATAGCTCGCCGCGAAGGTATACGGCTCGCAGCTCCCTTCAACGCAGCGCCTACGTCGTGGAGAAGAGCTGACCTGGAGAGAGCTCTTCAAGCCATACGATGCGGTGCGGCCTCTGTGCAACGAGCAGCGACTCAGTTCGGAATACCCACCGGTACTTTGTACGGGCGTTGTAAGCGGGAAGGAATTGAGCTATCTCGCTCCAACCCAACACCGTGGTCTGAAGACGCTATGGGAGAGGCATTAGAAGCTGTCAGAGTCGGACAGATGTCCATAAACCAAGCAGCGATTCATTACAATCTGCCTTACTCGTCGCTGTATGGTCGCTTCAAGCGCTGCAAATATCCACCTGTGCAGAACCAACCAGTACAACAAGACATACCAACACACTCCGACACGGAAAACCAACCTCAAGATCCGTACTACCAGCAGATGTCCCACGCCATGCTCGCGGATGAGCTCCAGAGCCCGTACGTACACGATGTGGACACGTCGCACATACAGTACGCGCAGTACTACGCGCAGTGCAACGTGTCCAGCTGA
- Protein Sequence
- MPGSESFHVKCELPSDEDESNSQFANSFSHQLSSDYVPVKLEPNSQIDDNASTNLLHHFQCVEGTLEELAPAPAGPAATPVCEQLPSTHDASFATLEPASYAAVVGSSLIDRHIKMMSANEVADSADFVPLMSIKDEPTSEGEQQHFSGDDNSDSNGALHESASRSSPKSWTQQDMEKALEALRKHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGASKSWSEADLRGALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTSWRRADLERALQAIRCGAASVQRAATQFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRCKYPPVQNQPVQQDIPTHSDTENQPQDPYYQQMSHAMLADELQSPYVHDVDTSHIQYAQYYAQCNVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00205043;
- 90% Identity
- -
- 80% Identity
- -