Bmin002119.1
Basic Information
- Insect
- Bactrocera minax
- Gene Symbol
- lrrfip2
- Assembly
- None
- Location
- JAPVRH010001500.1:40166-49262[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.1e-117 2e-112 375.6 32.0 1 299 263 557 263 558 0.92 2 2 0.21 4.5e+03 -3.1 5.5 7 28 590 613 564 631 0.48
Sequence Information
- Coding Sequence
- ATGTCAGAAGCTGTAAACAATAATGTCTTGTCCCGTGTTGGTGATGATAGTTGCATTGCTACAGATTCTTCTAATAAGGAGAAAcatcaaaacaacaacgatTGTGGTTTAAGTAAAAAGTACACAATAAGTATTAGTACGAATAGTAACGATGATGAAATCATCGAGGACGGAGTCGACTACAGCGAAGCCGACCTGTTAGACGAGTTAAATGCCAGCGACGACCACAACGACGTAAACGGCGACGTTAGAGACAACGTCGAAAGAAATGCGAACATTCAAACATATAACACTCATCATCTTCGCATCACACAAGATGCGGAAAAAAAGGGTGAAGAACGTGCAAATATTACCGGTACATTTTCTCTTAATGACCATGTAAGCGACATAAATTCTCATGACAATAAAGCAAGATTGACAAATGTTGTTGCGAGTGATTGTGTGCCAATTGTAAGCACTGATAATGCGCCAACCAGTGCAAGTGATAAGCAAAAAGTTACACCGACTAACTTAGTGCTATGTGCCGACACCGACGAGCCAAACGCAAGGGTAGATGGCGTTGACTCATACTGTCCCATAACGCCACGACGTATAGTTGATGTTGAAGCTGAGCCTAATCCATTGTTAAAAAGTAGTTCCACAACACGCAtagaaagcaacaataaaaatcttGTTGATGATGCCGGAATTGCTGGCAACAATGATCATTGTGATGatggttattattattctgATGAGCCCGAAGATGAATTAATTGTACAGTTCCTGGGAGAAGCCAATCGTattGCCGAGGCCCGTTTGGCTGCTCGACGACAAGCGCGCGCTGAAGCTCGCGAAATACGAATGAGAGAGTTGGAACGCCAACAGAAGGAGCAGGAGCAAAATGCAGATCGTGTTTTTGACATGCACACCTCAAGCAGCGTCGACCCGTTATCGCGGTCACGGCTCGCAACTGGGGTCGGCAGCTCACCACTGGGTGCAGTGCTCAACAGCACACGGGCCAACTCAATGTCATCTCGACGCAGCAGTGAAGATTCACTGGAAGAAGAAGGCCGCAGTCTGCGGGATATACGACATGAACTCAAGGACGTTGAAGAAAGGTTTCGAAAGGCCATGATAGCTAATGCACAGTTGGATAACGAACGCGCTTCGCAAACTTATCAAATACAACTGTTGAAGGATAAACTAGAAGAAATGGAAGAATCATATGCGCAGCTTCAGCGTGAATTTAGAGATAAGTCACGTGATTGTAATGCGTTGAAAAGGAATCTggataaattaagtgaagaaCTTAAATTGGTGCAAGGTCAACTAACTGAACGGGATAAACTAATCGCGGATCAGGGCTTAGTTATTGTGGCAGTAGAGAATGAAGAGGGTACCGATGCAAAACGTGCTCTAGTCAGTGTTGAAAATGCTCAGCTGTTAGGTTCAGTGCAAGGCTCATTAGATGTGCGACTGAAAAAGTTCAGCgaggaaaaacaacaacttttaGCAGAAGTGCAAAAACTGCAGGAGACATTAGAAAATTACAAGAGCCAAGGCAAGGGGCGATCCAATTCACTTAACGGACCATCAGGTTCTGACGAGGATTATGAAGCACAAAGAGAggcgaataaaataatatcagaCTACAAGTATAAACTGCAAAAGGCTGAACAAGAAATCGCCAGCTTACAAGCGAGCTTGGCGCGTTCAGAAACGCAAGTTATACGATATAAAAGCACAGCGGAAGCGGCAGAAAAAGCTGAAGCTGAGCTCAAAATCGAACGGAGAAAGCTGCAAAGAGAAAATCGTGAGGCCATGGAACGTATGGAGGAATTGGAAACTTCAAATAATCACCTGCTGAAGCGACTAGACAAactaaaaaatgctaaaagcGCATTGCTTAAAGATCTTTGA
- Protein Sequence
- MSEAVNNNVLSRVGDDSCIATDSSNKEKHQNNNDCGLSKKYTISISTNSNDDEIIEDGVDYSEADLLDELNASDDHNDVNGDVRDNVERNANIQTYNTHHLRITQDAEKKGEERANITGTFSLNDHVSDINSHDNKARLTNVVASDCVPIVSTDNAPTSASDKQKVTPTNLVLCADTDEPNARVDGVDSYCPITPRRIVDVEAEPNPLLKSSSTTRIESNNKNLVDDAGIAGNNDHCDDGYYYSDEPEDELIVQFLGEANRIAEARLAARRQARAEAREIRMRELERQQKEQEQNADRVFDMHTSSSVDPLSRSRLATGVGSSPLGAVLNSTRANSMSSRRSSEDSLEEEGRSLRDIRHELKDVEERFRKAMIANAQLDNERASQTYQIQLLKDKLEEMEESYAQLQREFRDKSRDCNALKRNLDKLSEELKLVQGQLTERDKLIADQGLVIVAVENEEGTDAKRALVSVENAQLLGSVQGSLDVRLKKFSEEKQQLLAEVQKLQETLENYKSQGKGRSNSLNGPSGSDEDYEAQREANKIISDYKYKLQKAEQEIASLQASLARSETQVIRYKSTAEAAEKAEAELKIERRKLQRENREAMERMEELETSNNHLLKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00192812; iTF_00193560; iTF_00191358; iTF_00189951; iTF_01563773; iTF_01562892;
- 90% Identity
- iTF_00192812; iTF_00189951; iTF_00193560; iTF_00191358;
- 80% Identity
- -