Ztau007895.1
Basic Information
- Insect
- Zeugodacus tau
- Gene Symbol
- lrrfip2
- Assembly
- GCA_031772095.1
- Location
- CM062650.1:17208540-17219959[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.38 1.1e+04 -4.0 0.2 146 159 31 44 19 61 0.41 2 3 2e-116 5.9e-112 374.5 30.8 1 299 279 573 279 574 0.92 3 3 0.21 6.1e+03 -3.2 5.5 7 28 606 629 580 647 0.48
Sequence Information
- Coding Sequence
- ATGTCAGATGCTCTAAACAATAACGACCTGTCCCGTGTTGGTGATTGTAcgaaaaattatgataattgCATTGCCACAGATTCTTCTAATAAGGAgacacaacaaaacaacaacgattgtgaattaaataaaaagtacacAACAAGTATTAGTACGAATAGTAATGATGAACTCATCGAGGAGGGATTCGACTATTGCGAAGCCGACCTGTTAGACGAGTTAAATGCTAGCGACGGCGACGCCGACGACGATGACGGTGGCATAGCAAACGGCGACGTTGACGACAATGTCGAAAGAAATGCgaacattcaaaaatataacaCTCATCATCTTCCCAACACACAAGTTGCGGACAAGAAGGGTGAAGTTGGAGAACGTGCAAATATTACCGGTACATTTTCTCTTAATGACCAAATAAGCGACACACATGCTCATGACATTAACACAAGATCGTCGAATGTTGCGAGCGTCGTCGACAGTGATTGTGTGCCAATTGTGAGCACTGATAATGTGCCAACCAATGCAAGTGATAAGCAAAAACTTACACCGACTAACTTAGTGTTGAGTGCCGACAACGACGATCCAACTGTGCGAGTAGATGGCGTTGATTCATACTGTCCCATAACACCACGCCGTATTGTTGATGTTGAAGCTGAGCCTAATCCATTGTTAAAATGTAGTTCCACAGCACGCATAGAAAGCAATAATGaaaatgttgttgatgatgCCGCAGTTGTTGGCAATAACAATGATCATGGTGATGAAGGTTATTATTATTCTGATGAGCCCGAAGATGAATTAATTGTACAGTTCCTGGGAGAAGCCAATCGTATTGCCGAGGCCCGTTTGGCTGCTCGCCGACAAGCGCGCGCTGAAGCACGTGAAATACGAATGCGAGAGTTGGAACGCCAACAAAAGGAGCAAGAGCAAAATGCAGATCGTGTTTTTGACATGCACACCTCGAGCGGCATCGACCCGTTATCGCGGTCACGGCTCGCAACCGGCGTCGGCAGCTCACCACTGGGCGCAGTGCTCAACAGCACACGAGCCAACTCAATGTCATCACGACGCAGCAGTGAAGATTCACTGGAAGAAGAAGGGCGCAGTCTGCGCGATATACGACATGAGCTCAAGGACGTCGAGGAGAGATTTCGTAAGGCTATGATAGCCAATGCACAGTTGGATAACGAACGAGCTTCGCAAACGTATCAAATACAACTGTTGAAGGATAAACTAGAAGAGGTGGAGGAATCTTATGCGCAGCTACAACGTGAATTTAAGGATAAGTCACGTGATTGCAATGCGCTAAAAAGGAATCTGGATAAATTAAGTGAAGAACTTAAATTGGTGCAAGGTCAACTAACTGAACGGGATAAACTAATCGCCGATCAGGGCTTAGTTATTGTGGCCGTAGAGAATGAAGAGGGTACCGATGCAAAACGTGCTCTAGTCAGTGTGGAAAATGCTCAGCTGTTAGGTTCAGTGCAAGGCTCATTAGATGTGCGACTGAAAAAGTTCAGCGAGGAGAAACAACAACTTTTAGCAGAAGTGCAAAAGCTGCAGGAGACATTAGAAAATTACAAGAGCCAAGGCAAGGGGCGTTCCAATTCGCTTAACGGGCCATCAGGTTCTGACGAGGACTATGAAGCGCAAAgaGAGGCGAATAAAATAATATCGGACTACAAGTATAAACTGCAAAAGGCTGAACAAGAAATCGCCAGTTTACAAGCGAGCTTGGCACGTTCAGAAACGCAAGTTATACGTTATAAAAGCACAGCGGAAGCGGCTGAAAAGGCTGAAGCTGAACTCAAAATCGAACGGAGAAAGCTACAAAGAGAAAATCGCGAGGCCATGGAACGTATGGAGGAATTGGAAACTTCAAATAATCACCTGCTGAAGCGCCTAGACAAACTAAAGAATGCTAAAAGCGCATTGCTTAAGGATCTCTGA
- Protein Sequence
- MSDALNNNDLSRVGDCTKNYDNCIATDSSNKETQQNNNDCELNKKYTTSISTNSNDELIEEGFDYCEADLLDELNASDGDADDDDGGIANGDVDDNVERNANIQKYNTHHLPNTQVADKKGEVGERANITGTFSLNDQISDTHAHDINTRSSNVASVVDSDCVPIVSTDNVPTNASDKQKLTPTNLVLSADNDDPTVRVDGVDSYCPITPRRIVDVEAEPNPLLKCSSTARIESNNENVVDDAAVVGNNNDHGDEGYYYSDEPEDELIVQFLGEANRIAEARLAARRQARAEAREIRMRELERQQKEQEQNADRVFDMHTSSGIDPLSRSRLATGVGSSPLGAVLNSTRANSMSSRRSSEDSLEEEGRSLRDIRHELKDVEERFRKAMIANAQLDNERASQTYQIQLLKDKLEEVEESYAQLQREFKDKSRDCNALKRNLDKLSEELKLVQGQLTERDKLIADQGLVIVAVENEEGTDAKRALVSVENAQLLGSVQGSLDVRLKKFSEEKQQLLAEVQKLQETLENYKSQGKGRSNSLNGPSGSDEDYEAQREANKIISDYKYKLQKAEQEIASLQASLARSETQVIRYKSTAEAAEKAEAELKIERRKLQRENREAMERMEELETSNNHLLKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00192086;
- 90% Identity
- iTF_01562892;
- 80% Identity
- -