Basic Information

Insect: Bactrocera latifrons
Gene Symbol: lrrfip2
Assembly: GCA_001853355.1
Location: NW:655468-669651[+]

Transcription Factor Domain

TF Family: LRRFIP
Domain: LRRFIP domain
PFAM: PF09738
TF Group: Unclassified Structure
Description: LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 3.3e-117 4.1e-113 377.1 30.5 1 299 271 565 271 566 0.92

2 2 0.21 2.6e+03 -3.1 5.5 7 28 598 621 572 639 0.48

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	3.3e-117	4.1e-113	377.1	30.5	1	299	271	565	271	566	0.92
2	2	0.21	2.6e+03	-3.1	5.5	7	28	598	621	572	639	0.48

Sequence Information

Coding Sequence: ATGTCAGATGCTCTAAACAATAACGTCCTGTCCCGTGTTGGTGATGATGTTTGTATGAGCACAGATTCCACAGATTCATCTAATAAGGAaaaacatcaaacaaacaaCGATTGtggtttaaataaaaagtacacaacaaGCATTAGTACGAATAGTAATGATGAAATCATCGAGGAGGGATTCGACTATAGCGAAGCTGACCTGTTAGACGAGTTAAATGCTAGCGACGACGACCAAGACGTCGACGTAAACGGCGGCGTTAACGACAATCTCGAAAGAAATGCgaacattcaaaaatataacacTCATGATCTTCCCATCACACAAGGTGCGGACAAGAAGGGTGAAGCATGCGAAAAAATTACCGGTGCTTTTTCTCTTAGTAACCATGTAACTGACACGAATTCTCATGACAATAAAACAAGATCAACGAACATTGTTGCGAACGACGTCGGCAGTGATTATGTGCCAATTGTGAGCACTGATAATGCGCCAAACAGTGCAAGTGATAAGCAAAAAGTTACACCGACTAACTTAGCATTGTGTAGCGACACCGACCAACCAAACGCAAGTGAAGTTGGCGTTGACTCATATTGTCCGATAACACCGCGATGTATAGTTGATGTTGAAGCTGAGCCTAATCCATTGTTAAAAAGTAGTTCCACAACACgcattaaaagcaacaataaaaatgttgttgatgatggcGGGGTTGCTAGCAACAATGATCATGGTGATGAAGGTTATTATTATTCCGATGAGCCCGAAGATGAATTAATTGTACAGTTCCTGGGAGAAGCCAATCGtattGCCGAGGCCCGTTTGGCTGCTCGACGACAAGCGCGCGCTGAGGCACGTGAAATACGGATGCGTGAGTTGGAACGCCAACAGAAGGAGCAAGAGCAAAATGCAGACCGTGTTTTTGACATGCATAGCTCGAGCGGCATCGACCCATTATCGCGGTCACGGCTTGCCACTGGCGTTGGCAGTTCACCGCTCGGTGCAGTGCTTAACAGCACACGAGCTAACTCGATGTCATCACGACGCAGCAGTGAAGACTCACTAGAGGAAGAAGGCCGCAGTCTGCGTGATATACGACATGAACTCAAGGATGTTGAGGAAAGGTTTCGAAAGGCCATGATAGCCAATGCCCAGTTGGATAATGAACGCGCTTCGCAAACGTATCAAATACAACTATTGAAGGATAAACTAGAAGAAATGGAAGAATCTTATGCGCAGCTTCAGCGTGAATTTAAAGATAAGTCACGTGAATGTAATGCGCTGAAAAGAAATCTGGATAAATTAAGTGAAGAACTTAAATTGGTGCAAGGTCAACTAACTGAACGCGACAAACTAATCGCGGATCAGGGGTTAGTTATTGTAGCCGTAGAGAATGAGGACGGTACCGACGCAAAACGTGCTCTAGTCAGTGTTGAAAATGCTCAGCTGTTAGGTTCAGTGCAAGGCTCATTagATGTGCGACTGAAAAAGTTTAGCGAGGAGAAACAACAACTTTTTGCAGAAGTGCAAAAACTGCAGGAGACATTAGAAAATTACAAGAGCCAAGGCAAGGGTCGATCCAATTCACTTAACGGACCAACAGGTTCTGACGAAGATTATGAAGCTCAGAGGGAGgcgaataaaataatatcagaCTACAAGTATAAACTGCAAAAGGCTGAACAGGAAATCGCCAGCTTACAAGCGAGCTTGGCACGTTCGGAAACGCAAGTTATACGGTATAAAAGTACAGCGGAAGCGGCTGAAAAAGCTGAAGCTGAACTTAAAATAGAACGGAGAAAACTGCAAAGAGAAaatcgTGAAGCCATGGAACGTATGGAGGAATTGGAAACTTCAAATAATCACCTGCTGAAGCGACTAGACAAACTAAAGAATGCTAAAAGCGCTTTGCTTAAAGATCTCTGA
Protein Sequence: MSDALNNNVLSRVGDDVCMSTDSTDSSNKEKHQTNNDCGLNKKYTTSISTNSNDEIIEEGFDYSEADLLDELNASDDDQDVDVNGGVNDNLERNANIQKYNTHDLPITQGADKKGEACEKITGAFSLSNHVTDTNSHDNKTRSTNIVANDVGSDYVPIVSTDNAPNSASDKQKVTPTNLALCSDTDQPNASEVGVDSYCPITPRCIVDVEAEPNPLLKSSSTTRIKSNNKNVVDDGGVASNNDHGDEGYYYSDEPEDELIVQFLGEANRIAEARLAARRQARAEAREIRMRELERQQKEQEQNADRVFDMHSSSGIDPLSRSRLATGVGSSPLGAVLNSTRANSMSSRRSSEDSLEEEGRSLRDIRHELKDVEERFRKAMIANAQLDNERASQTYQIQLLKDKLEEMEESYAQLQREFKDKSRECNALKRNLDKLSEELKLVQGQLTERDKLIADQGLVIVAVENEDGTDAKRALVSVENAQLLGSVQGSLDVRLKKFSEEKQQLFAEVQKLQETLENYKSQGKGRSNSLNGPTGSDEDYEAQREANKIISDYKYKLQKAEQEIASLQASLARSETQVIRYKSTAEAAEKAEAELKIERRKLQRENREAMERMEELETSNNHLLKRLDKLKNAKSALLKDL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00192086;
90% Identity: iTF_00192086;
80% Identity: -