Basic Information

Insect: Bactrocera oleae
Gene Symbol: Lrrfip2
Assembly: GCA_001188975.4
Location: LGAM02028583.1:3787959-3800354[+]

Transcription Factor Domain

TF Family: LRRFIP
Domain: LRRFIP domain
PFAM: PF09738
TF Group: Unclassified Structure
Description: LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 1.2e-116 2.4e-112 375.3 30.4 1 299 269 563 269 564 0.92

2 2 0.21 4.3e+03 -3.1 5.5 7 28 596 619 570 637 0.48

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	1.2e-116	2.4e-112	375.3	30.4	1	299	269	563	269	564	0.92
2	2	0.21	4.3e+03	-3.1	5.5	7	28	596	619	570	637	0.48

Sequence Information

Coding Sequence: ATGTCAGATGCTCTAAACAATAACGTCCTGTCCCGTGTTGGTGATGATAATTGCATTGCTACAGATTCATCTAATAAGgaaaaacatcaaaacaacAAAGATTGtggtttaaataaaaagtacacAACAAGTATTAGTACGAATAGTAACGATGAAATCATCGAGGAGGGATTCGACTATAGCGAAGCCGACCTGTTAGACGAGTTAAATACTAGCGACGACGACCACGACGTTGACGTAAACAGCGGCGTTAACGACAATGTCGAAAGAAATGCgaacattcaaaaatataacacTCATCATCTTCCCATCACACAAGATGCGGACAAAAAGGGTGAAGCATGTGCAAATATTGCCGGTACATTTTCTCTTAATAACCATGTAACCGACACAAATTCTCATGACAATAAAACAAGATCAACGAACGTTGTTGCGAGCGACGTCGACAGTGATTGTGTGCCAATTGTGAGCACTGATAATGCGCCAACCAGTGCAAGTGATAAGCAGAAAGTTACACCGACTAACTTAGTGCTGTGTGGCGACAACGACCAACCAAACGCAAGAGAAGTTGGCGTTGACTCATATTGTCCCATAACGCCGCGTTGTATAGTTGATGTTGACGCTGAGACGCCTAATCCATTGTTAAAAAGTAGTTCCACAACACGCAtagaaagcaacaataaaaatattgttgatgATGCCGGAGTTGCTGGCAACAATGATCATTGTGATGAAGGTTATTATTATTCTGATGAGCCCGAAGATGAATTAATTGTACAGTTCCTGGGAGAAGCCAATCGTAttGCCGAGGCCCGTTTGGCTGCTCGACGACAAGCGCGCGCTGAGGCACGCGAAATACGGATGCGTGAGTTGGAACGCCAACAAAAGGAGCAAGAGCAAAATGCAGACCGTGTTTTCGACATGCACACCTCAAGCGGCATCGACCCATTATCGCGGTCACGGCTCGCAACCGGTGTCAGCAGCTCACCTCTCGGTGCAGTGCTTAACAGCACACGGGCCAACTCGATGTCATCACGACGCAGCAGTGAAGACTCACTGGAGGAAGAAGGCCGCAGTCTGCGGGATATACGGCATGAACTCAAGGATGTTGAGGAAAGATTTCGAAAGGCCATGATAGCCAATGCGCAATTGGATAACGATCGCGCTTCGCAAACGTATCAAATACAACTGTTGAAGGACAAACTAGAGGAAGTGGAAGAATCTTATGCGCAGCTTCAGCGTGAATTTAAGGATAAGTCACGTGATTGCAATGCGCTAAAAAGGAATCTGGATAAATTAAGTGAAGAACTTAAATTGGTGCAAGGTCAACTAACTGAACGCGATAAACTAATCGCAGATCAGGGCTTAGTTATTGTAGCCGTAGAGAATGAAGAGGGTACCGATGCAAAACGTGCTCTAGTCAGTGTTGAAAATGCTCAGCTGTTAGGTTCAGTGCAAGGCTCACTAGATGTGCGACTGAAAAAGTTCAGCGAGGAGAAACAACAACTTTTAGCAGAAGTGCAAAAACTGCAGGAGACATTAGAAAATTATAAGAGCCAAGGCAAAGGGCGATCCAATTCACTTAACGGACCATCAGGTTCTGACGAGGATTATGAAGCACAAAGGGAGgcgaataaaataatatcagaCTACAAGTATAAACTGCAAAAGGCTGAACAAGAAATCGCCGGCTTACAAGCAAGCTTGGCACGTTCAGAAACACAAGTTATACGTTATAAAAGCACGGCGGAAGCGGCTGAAAAAGCTGAAGCTGAACTAAAAATAGAACGGAGAAAGCTGCAAAGAGAAaatcgTGAGGCCATGGAACGTATGGAGGAATTGGAAACTTCAAATAATCACCTGCTGAAGCGACTAGACAAACTAAAGAATGCTAAAAGCGCTTTGCTTAAAGATCTCTGA
Protein Sequence: MSDALNNNVLSRVGDDNCIATDSSNKEKHQNNKDCGLNKKYTTSISTNSNDEIIEEGFDYSEADLLDELNTSDDDHDVDVNSGVNDNVERNANIQKYNTHHLPITQDADKKGEACANIAGTFSLNNHVTDTNSHDNKTRSTNVVASDVDSDCVPIVSTDNAPTSASDKQKVTPTNLVLCGDNDQPNAREVGVDSYCPITPRCIVDVDAETPNPLLKSSSTTRIESNNKNIVDDAGVAGNNDHCDEGYYYSDEPEDELIVQFLGEANRIAEARLAARRQARAEAREIRMRELERQQKEQEQNADRVFDMHTSSGIDPLSRSRLATGVSSSPLGAVLNSTRANSMSSRRSSEDSLEEEGRSLRDIRHELKDVEERFRKAMIANAQLDNDRASQTYQIQLLKDKLEEVEESYAQLQREFKDKSRDCNALKRNLDKLSEELKLVQGQLTERDKLIADQGLVIVAVENEEGTDAKRALVSVENAQLLGSVQGSLDVRLKKFSEEKQQLLAEVQKLQETLENYKSQGKGRSNSLNGPSGSDEDYEAQREANKIISDYKYKLQKAEQEIAGLQASLARSETQVIRYKSTAEAAEKAEAELKIERRKLQRENREAMERMEELETSNNHLLKRLDKLKNAKSALLKDL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00192086;
90% Identity: iTF_00192086;
80% Identity: -