Aio025558.1
Basic Information
- Insect
- Automeris io
- Gene Symbol
- bab1_2
- Assembly
- GCA_036320925.1
- Location
- JAUDJH010000036.1:3004833-3012887[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-17 1.4e-14 54.2 0.0 1 43 28 71 28 73 0.95 2 2 6.3 4.2e+03 -1.7 1.6 6 15 165 174 161 176 0.83
Sequence Information
- Coding Sequence
- ATGTGGCAGAAGTGCTGGAACACCAACCAAACCTTGGTCCACAACTTGAGGTTCCGCGAGCGCGGCCCGCTGAAGTCCTGGAGGCCGGAGACCATGGCCGAGGCCATCTTCTCGGTGTTGAAGGAGGGTCTCTCCCTCTCCCAGGCAGCGCGAAAGTACGACATACCGTATCCGACCTTCGTGCTCTATGCTAACCGCGTCCACAACATGCTCGGACCAAGCGCCGACGGAGGGGCTGATTTGAGACCCAAAGGACGCGGTCGTCCTCAAAGGATTTTGCTGGGCGTGTGGCCCGACGAGCACATCCGCGGAGTAATACGCGCCGTCGTGTTTCGAGACACTCACACTCCGATCTCCAATGCGCATCACATGCGGGAAATTGAATTACCGGCTTATCCCGCCATCACGGACGGGACAGTAACTCCGACCGCGTACGTGCCGATACCGTGCGGCAACGGGCGCGAGGAGCGCGTGTCGCCCAACGCCGCGGCAGCCGCAGCGGTCGCTGCTGTCGCGCACGGCCTGCGCCGTCAGATGTGCAACATGGTCGTCGCCGCGCAACGCCCGCCAGACCAGCCCACCCATCTCGGCCTGCCCTCCCTCCCGATGCAGTCCCCGCGCATGCCCTCGCCCATGTCGTCAGGGCTCGAGTCGCCGCTCTGCTCGCCCTTGCCTCCGGGCCAGGCGCTCGAGCCGCCCAAGCCCGCGGACCCATTCCGCCCGTTCGTGTCCCCGCGCTCCGAGATTCGCGAGACCGTCGAGTCGGTCGAGATGGGTCCGCCAAAGACCCCCGTGCCCGCCAGGAACGGCCAGCCTACTCCCGCCATGGACTTGGACATGGAGGACCGGAGCGATATCTGA
- Protein Sequence
- MWQKCWNTNQTLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDTHTPISNAHHMREIELPAYPAITDGTVTPTAYVPIPCGNGREERVSPNAAAAAAVAAVAHGLRRQMCNMVVAAQRPPDQPTHLGLPSLPMQSPRMPSPMSSGLESPLCSPLPPGQALEPPKPADPFRPFVSPRSEIRETVESVEMGPPKTPVPARNGQPTPAMDLDMEDRSDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00187065; iTF_00341254; iTF_01429858; iTF_00819075; iTF_00819980; iTF_00063503; iTF_01010287; iTF_01358806; iTF_00859385; iTF_01316233; iTF_01317198; iTF_00114034; iTF_00787541; iTF_00428920; iTF_01312156; iTF_00113246; iTF_01415747; iTF_00810920; iTF_01219707; iTF_01099773; iTF_00737390; iTF_00632682; iTF_01161238; iTF_00007004; iTF_01416695;
- 90% Identity
- iTF_01316233;
- 80% Identity
- iTF_00187065;