Tocu000446.1
Basic Information
- Insect
- Tethea ocularis
- Gene Symbol
- bab1
- Assembly
- GCA_963555595.1
- Location
- OY741956.1:5033894-5036362[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-17 1.2e-14 54.2 0.0 1 43 28 71 28 73 0.95 2 2 6.2 3.7e+03 -1.8 1.6 6 15 164 173 160 175 0.83
Sequence Information
- Coding Sequence
- ATGTGGCAAAAATGCTGGAGCACAAACCAGTCTCTGGTCCACAACCTACGCTTTCGCGAGCGTGGCCCGCTCAAGTCATGGCGGCCCGAAACCATGGCTGAAGCCATCTTCTCGGTCCTCAAGGAAGGACTCTCGCTGTCGCAAGCCGCACGAAAATACGACATCCCGTATCCGACGTTTGTCCTTTACGCTAACAGAGTCCACAATATGCTAGGACCCAGCGCCGATGGAGGGGCCGATTTGAGGCCCAAAGGTCGAGGTCGCCCGCAAAGGATTCTGTTGGGTGTGTGGCCCGACGAACACATCAGAGGAGTTATTCGTGCCGTGGTCTTCAGGGACACTCATGCACCTCATGCCACGCACCACATCAAGGAAGTGGAACTACCCACGTACCCTGCCATTGCGGACAGCGTGGGTGTACAGAACGCATACGGCGCCGTGAGCTGCGGCAATGGGCGCGAGGGTCGCGTGTCGCCGAAcgcggccgccgccgccgccgtcgcgGCCGTAGCGCACGGCCTGCGCCGCCAGATGTGCAACATGGTCGTAGCCGCCCAGAGGCCGGTGGATGCCCCGCCGCACCTGACCCTGCCGCCGCTGCCGCTGCAGTCCCCGCGGCTGCCGTCGCCGCTCTCCGCGGGACTCGAGTCCCCGCTGTGTTCGCCTGCGCCACCCGGCCTGGCCCTGGAGCCGAAGCCTGCCGACCCTTTCCGCCCGTTCGCCTCGCCGCGCCCTAATAGCCGCTATGGAGAACGCGAAGTAGACATGAGTGAGATGGGACCGCCGAAGACGCCGGTAGCGATATCCAAGAACGGTCAGGGCGGATCACCCGTAGAGCTGCTGCCGGCCCCGGCCGACGGGCGAGCGGACATCTGA
- Protein Sequence
- MWQKCWSTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDTHAPHATHHIKEVELPTYPAIADSVGVQNAYGAVSCGNGREGRVSPNAAAAAAVAAVAHGLRRQMCNMVVAAQRPVDAPPHLTLPPLPLQSPRLPSPLSAGLESPLCSPAPPGLALEPKPADPFRPFASPRPNSRYGEREVDMSEMGPPKTPVAISKNGQGGSPVELLPAPADGRADI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00187066;
- 90% Identity
- iTF_01436945; iTF_00761552; iTF_00007004; iTF_01416695; iTF_01083228;
- 80% Identity
- -