Sjap001323.1
Basic Information
- Insect
- Saturnia japonica
- Gene Symbol
- bab1
- Assembly
- GCA_033032175.1
- Location
- CM065304.1:16820433-16831893[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.9e-17 2.5e-14 53.9 0.0 1 43 64 107 64 109 0.95
Sequence Information
- Coding Sequence
- ATGACGGCGGGCGCCCCTTGCCGCGCAAGGCTTATAGAAAGCTCTCAGGCTTGGCTCGGACCATCCACATCAGCTATTGCagACAGTTACCAATATCAACTGCAATCGATGTGGCAGAAATGCTGGAACACCAATCAAAACTTGGTCCACAACTTGAGGTTCCGCGAACGTGGCCCCCTGAAGTCTTGGAGGCCGGAGACCATGGCTGAAGCTATATTTTCTGTCCTGAAGGAGGGTCTCTCTCTTTCCCAAGCTGCGAGGAAGTACGACATACCATACCCAACCTTTGTTTTGTATGCTAACCGCGTCCACAACATGTTGGGACCGAGTGCTGATGGAGGAGCTGATTTGAGACCAAAAGGGCGCGGTCGTCCGCAAAGGATTTTGCTGGGCGTGTGGCCCGACGAGCACATCCGCGGGGTAATACGCGCTGTCGTGTTCCGAGACACTCATACTCCGCACTCCAATCCGCATCACATGCGGGAGATAGAATTACCGGCTTATCCTGCCATCACGGACGGCACTGTTACTCCGAACGCGTATGCTTCAATCCCATGCGGCAACGGGCGTGAGGAACGCGTCTCTCCAAACGCTGCTGCCGCTGCTGCGGTAGCTGCAGTCGCGCATGGCCTGCGCCGTCAGATGTGCAATATGGTGGTGGCCGCCCAGCGCCCACCCGATCAACCGACTCACCTCGGCCTGCCCTCACTGCCGTTGCAGTCTCCACGTCTACCATCACCACTATCGTCTGGACTCGAGTCTCCGCTCTGCTCCCCTCTACCCCCGGGCCAAGCCCTCGAGCCGCCAAAACCGGCCGACCCATTCCGCCCGTTCGTTTCCCCTCGTTCTGAAAGCCGCTTCAGTGAACGCGACGCCATAATGGAATCCGTTGAGATGGGCCCTCCTAAGACTCCGGTGCCTGCTAGGAATGGTCAGCCAACTCCTGCCATGGAGCTGGATGCACATGTTGAGGAGCGGGGGGACATTTGA
- Protein Sequence
- MTAGAPCRARLIESSQAWLGPSTSAIADSYQYQLQSMWQKCWNTNQNLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDTHTPHSNPHHMREIELPAYPAITDGTVTPNAYASIPCGNGREERVSPNAAAAAAVAAVAHGLRRQMCNMVVAAQRPPDQPTHLGLPSLPLQSPRLPSPLSSGLESPLCSPLPPGQALEPPKPADPFRPFVSPRSESRFSERDAIMESVEMGPPKTPVPARNGQPTPAMELDAHVEERGDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00187066;
- 90% Identity
- iTF_01317198; iTF_00114034; iTF_01312156; iTF_00113246; iTF_00341254; iTF_00063503; iTF_01010287; iTF_00112436; iTF_00428024; iTF_01429858; iTF_00819075; iTF_00819980; iTF_00787541; iTF_00428920; iTF_00290588; iTF_00859385; iTF_01358806; iTF_00187066; iTF_00187065;
- 80% Identity
- -