Tjap000800.1
Basic Information
- Insect
- Theretra japonica
- Gene Symbol
- bab1
- Assembly
- GCA_033459515.1
- Location
- CM065927.1:16376244-16378783[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-17 1.1e-14 54.2 0.0 1 43 28 71 28 73 0.95 2 2 4.5 3.2e+03 -1.8 1.6 6 15 165 174 161 176 0.83
Sequence Information
- Coding Sequence
- ATGTGGCAAAAGTGCTGGAACACTAATCAGAACCTGGTCCACAATCTGAGATTCCGCGAGCGTGGCCCCCTGAAGTCCTGGCGGCCCGAGACCATGGCCGAGGCCATCTTCTCCGTATTGAAAGAGGGACTGTCCCTGTCGCAAGCAGCGAGGAAGTACGACATCCCCTACCCGACGTTCGTTCTGTACGCCAACCGGGTGCACAACATGCTAGGACCCAGCGCGGACGGTGGCGCCGATTTGAGACCCAAGGGACGCGGTCGCCCGCAGAGGATTCTGCTGGGTGTGTGGCCAGACGAGCACATCCGTGGAGTAATCCGCGCCGTCGTGTTCCGAGACACTCACGCTCCGCACGCCAACCCACACCACATGCGCGAGATCGATCTCCCGACCTATCCAGCCATCACGGATGGCACCGTGGCGCCCAACACCTACGCCGCTGTGGGATGTGGAAACGGGCGCGAGGAGCGTGTATCGCCcaacgccgccgccgccgccgctgtgGCCGCCGTCGCGCACGGCCTGCGCCGTCAAATGTGCAACATGGTGGTTGCCGCTCAGCGCCCCCCGGACCAGCCCCCTCACCTGGGCCTGCCCTCTCTGCCGCTCCAGTCGCCGCGGCTGCCGTCGCCACTCTCTTCCGGCCTGGAGTCTCCGCTGTGCTCGCCCTTGCCACCTGGTCAAGCGCTCGAGCCCGCTAAGCCGGTGGATCCGTTCCGCCCGTTTGTTTCGCCGCGCCCTGAGAGCCGCTTTGGTGAGCGTGAGACGGTTGTAGAGCCAATGGAAATGGGCCCGCCGAAGACCCCCTTGCCGGCCCGCAATGGTCAGCCTGCTCCGGCCATAGAGTTGGAGGCGCCATCGGATGAGCGAGCGGATATTTGA
- Protein Sequence
- MWQKCWNTNQNLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDTHAPHANPHHMREIDLPTYPAITDGTVAPNTYAAVGCGNGREERVSPNAAAAAAVAAVAHGLRRQMCNMVVAAQRPPDQPPHLGLPSLPLQSPRLPSPLSSGLESPLCSPLPPGQALEPAKPVDPFRPFVSPRPESRFGERETVVEPMEMGPPKTPLPARNGQPAPAIELEAPSDERADI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00187066;
- 90% Identity
- iTF_01316233;
- 80% Identity
- -