Acap008324.1
Basic Information
- Insect
- Apotomis capreana
- Gene Symbol
- -
- Assembly
- GCA_947623375.1
- Location
- OX392498.1:58869302-58871118[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.5e-17 2.1e-13 50.7 0.0 1 42 100 142 100 145 0.94 2 2 4.8 1.2e+04 -2.9 0.0 30 41 145 157 144 158 0.71
Sequence Information
- Coding Sequence
- ATGAACGTGGAACAGCTACCGATGGAGGGAGGCTCGGCCGGTTTGCCACAAGGACAATGGAGTATGATGGACGCGTACCCCCGATACTCGAACGCATGCCTCGGGCTTCAGCACACCGATCCGGCCATGTACATGGGTAATGTCATCAACCAACACATGGAGAATGACATCAACGAGTACGCCCAAGCGGTCGGCGTCACCGGGCCCAGTCCCGGGCCCAGCTGCGTCCCTGAAGCCCAGGTAGCCCAGGAACAACCCCCCGTACAGCCGAAAAGGCGACGAGCCACCAACCCGCAGTCGGAAGAAAACTTCCAGCGGGCACTCGAAGCCGTCCGCTTCGGCGGCATCGGCTTCTGCAAAGCTGCTAGAATGTTCGGCGTCAACAACAGGACACTATGGCTCGAATACAAAAAGAAAGGCTACCCCAACAACAGGCCGAGCATCAAGTCGCGCATCAAACGGGAGCACACGACCCCGCCGCCCGAGCATAAGGAGGAAACCCCGCTACAGGAGCAACAGATGGTCCTATGCCCGCCACATCCGGTCCCAGTAGGCTTCATAGACTCCAGACCTCTCGACTTCCCGCTACAAGGAGTCCCGCACAACTCGCCTCTCAATATTCTAGGGGTGAACTTCAATAATATGCAATAG
- Protein Sequence
- MNVEQLPMEGGSAGLPQGQWSMMDAYPRYSNACLGLQHTDPAMYMGNVINQHMENDINEYAQAVGVTGPSPGPSCVPEAQVAQEQPPVQPKRRRATNPQSEENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKGYPNNRPSIKSRIKREHTTPPPEHKEETPLQEQQMVLCPPHPVPVGFIDSRPLDFPLQGVPHNSPLNILGVNFNNMQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00149303; iTF_01072369; iTF_00410213; iTF_00660233; iTF_00658283; iTF_00657068; iTF_01133646; iTF_00289552; iTF_00656016; iTF_00654166; iTF_00871222; iTF_00409207; iTF_00411351; iTF_00659385; iTF_00412445; iTF_00680446;
- 90% Identity
- iTF_01072369;
- 80% Identity
- -