Enis016292.1
Basic Information
- Insect
- Epinotia nisella
- Gene Symbol
- -
- Assembly
- GCA_932294385.1
- Location
- CAKOAM010000071.1:648906-651086[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.4e-17 1.6e-13 50.6 0.0 1 42 112 154 112 157 0.94 2 2 3.7 7.8e+03 -2.8 0.0 30 41 157 169 151 170 0.77
Sequence Information
- Coding Sequence
- ATGGCTATTGTATCATTGCAGAACACTGATCCTCACATGAACGTCGAGCCATTGCCAATGGAGGGCGGCTCCGCTGGTCTACCACAAGGGGCGCAGTGGAGTATGATGGACACGTACCCCCGTTATTCCAACGCGTGTCTCGGCCTCCAACACGACCCGGCGATGTACATGGGCAACGTGATCAACCAGCACATGGAGAACGACATCAACGACTACGCGCAAGCTGTCGGCGTCACCGGCCCCAGCCCCGGCCCCAGCTGCGTCCCCGAAGCTCAGGTCGCGCAGGAGCAAACCCCCGTGCAGCCCAAGCGGCGCCGCGCGACCAACCCACAGTCGGAGGAAAACTTCCAACGCGCGCTGGAGGCCGTCCGCTTCGGCGGCATAGGCTTCTGCAAGGCTGCCAGAATGTTCGGCGTCAACAATCGGACCCTCTGGCTCGAATACAAAAAGAAAGGCTACCCGAACAACCGGCCGAGCATCAAATCCAGAATCAAACGCGAGCACACGACACCCCCGCCCGAACACAAAGAGGAAGCTCCCCTACAAGAACAACAGATGGTCCTCTGCCCCCCCCACCCGGTCCCGGTCGGCTTCATAGACTCCAGACCCCTCGATTTCCCCCTACAAGGCGTCCCGCACAACTCCCCCTTGAATATTCTAGGTGTGAACTTCAATAACATGCAATAG
- Protein Sequence
- MAIVSLQNTDPHMNVEPLPMEGGSAGLPQGAQWSMMDTYPRYSNACLGLQHDPAMYMGNVINQHMENDINDYAQAVGVTGPSPGPSCVPEAQVAQEQTPVQPKRRRATNPQSEENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKGYPNNRPSIKSRIKREHTTPPPEHKEEAPLQEQQMVLCPPHPVPVGFIDSRPLDFPLQGVPHNSPLNILGVNFNNMQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00148410;
- 90% Identity
- iTF_01072369;
- 80% Identity
- iTF_00660233;