Agos003307.1
Basic Information
- Insect
- Aphis gossypii
- Gene Symbol
- kn
- Assembly
- GCA_004010815.1
- Location
- NW:37832-124148[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-39 2.5e-35 121.3 0.1 43 117 55 129 46 136 0.94 2 2 2e-230 2.5e-226 752.0 1.8 44 564 140 684 130 691 0.84
Sequence Information
- Coding Sequence
- atggaGAAAAGTGACACAGACTCCGAGTATGAAAGCGGTGCTTTAGGACCACCAACTAAGAAGAAATTACGTACGGAAATTGTGCATAAAAAGTGTGTGACAATAGATTCAAGACAAGATTTTAAACCTAGTGAGACCCAATCAATTGATAATGAATCACGAAGtatcGGCGTGGGAAGGGCACATTTTGAGAAGCAACCTCCTAGCAATCTGAGAAAATCCAATTTCTTTCACTTCGTGATCGCGCTGTACGATAGGTCTCAACAGCCAATTGAAATCGAACGGACCGCGTTCATCGGATTCATCGAAAAGGACCAGGAATCCGAGTCACAGAAGACCAACAACGGTATTCAGTATAGACTTCAGCTGTTGTATGCTAACGGTAATGAACGTGCGCTGTTGCTCAAAAGCGGTCTtatcGGCGTGGGAAGGGCACATTTTGAGAAGCAACCTCCTAGCAATCTGAGAAAATCCAATTTCTTTCACTTCGTGATCGCGCTGTACGATAGGTCTCAACAGCCAATTGAAATCGAACGGACCGCGTTCATCGGATTCATCGAAAAGGACCAGGAATCCGAGTCACAGAAGACCAACAACGGTATTCAGTATAGACTTCAGCTGTTGTATGCTAACGgtgtGCGACAAGAACAAGATATATACGTGAGGCTCATCGATACCGTTACCAAACAGGCCATCATTTACGAGGGTCAAGACAAAAATCCTGAGATGTGCCGGGTGCTGCTAACACACGAAGTCATGTGCAGTCGATGCTGTGATAAGAAAAGTTGAGGCAACAGAAACGAAACGCCATCCGATCCGGTCATCATCGACAGatttttcttGAAGTTTTTCTTGAAATGCaatcaaaattgtttgaaaaacgCTGGAAATCCAAGAGACATGCGAAGGTTTCAAGTGGTAATTTCGACACAAGTTACAGTTGAAGGTCCTCTGTTGGCTGTATCGGATAACATGTTTGTGCACAACAATTCAAAACACGGACGCCGAGCAAAACGTTTAGACCCAAATGACGGTATGTTTTCTCCTCTACCCGTGGCGACACCGTGTATAAAACACATTACTCCGAGCGAAGGATGGACCCACGGCGGAGCTTCGGTCACTATATTGGGTGATAATTTTTTCGACGGGTTGCAAGTGGTTTTCGGCAGCAATCTAGTTTGGAGCGaaCTATTGACTCCACACGCCATACAAGTGCAAACACCGCCCAGGCCAATACCCGGCATCGTGGAAGTAACGTTGTCGTATAAATCCAAACAGTTTTGCAAAGGATCTCCTGGTAGATTCGCATACATATcaCTCAGCGAACCGACCATTGATTACGGTTTCCAAAGACTACAAAAATTTGTACCCAGATACCCAGGTGATCCCGAAAAACTACCAAAGGAAGTGATCCTGAAGCGTGCAGCAGATTTAGCGGAAGCGCTGTACACGATGCCCCGAAACAATCAGCTTTCGCTATCGCTGCCCAGGTCACCGTGCTCGCGGGACAGGGACAGCAACAACATGTCGTCGTCTGCAGGTGCGGTGGGCACCGGGTTCAACCCGTACACCGGACAGCTAGCGGTGACCGTACACGACCACGGTGCGACCGGTCAATGGAACGACGACGATTACGGACGCGGTCAGAGCAGCAGCGTGTCGCCCCGAGGCGGCGGTTACGGGTCCAGCGCATCGACGCCGCATTCGACCAACGGCACTAACGGAAGCACGTACATAAATCCGCCGCCAACCAGTGGTggtggcggcggtggcggtggaGGTGGCGgaagcggcggcggcggtggaaACGGTGGAAACCCGTCCAATTCCGGTCCCAACAATGGTAACGGGGGAAATTCCGGTTACAACGGTTCCACCATGCCCAACACCACGTCGGCCGCGTCGTCGGTTCAACTTACCAACATGAACTCGCCCACGGCCACTTCGCACCCATCACTCTTCAACTCTTCCTCGAGAATGGGTACTTTGGTCACATCTCCGTTCGCAATGAATCCGTTTGCTCTACCAAACTGCAACGGACAGCCGTACGCCACGAGCCCGTTAATCAGCTCGTCtgcgaaataa
- Protein Sequence
- MEKSDTDSEYESGALGPPTKKKLRTEIVHKKCVTIDSRQDFKPSETQSIDNESRSIGVGRAHFEKQPPSNLRKSNFFHFVIALYDRSQQPIEIERTAFIGFIEKDQESESQKTNNGIQYRLQLLYANGNERALLLKSGLIGVGRAHFEKQPPSNLRKSNFFHFVIALYDRSQQPIEIERTAFIGFIEKDQESESQKTNNGIQYRLQLLYANGVRQEQDIYVRLIDTVTKQAIIYEGQDKNPEMCRVLLTHEVMCSRCCDKKS*GNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVTVEGPLLAVSDNMFVHNNSKHGRRAKRLDPNDGMFSPLPVATPCIKHITPSEGWTHGGASVTILGDNFFDGLQVVFGSNLVWSELLTPHAIQVQTPPRPIPGIVEVTLSYKSKQFCKGSPGRFAYISLSEPTIDYGFQRLQKFVPRYPGDPEKLPKEVILKRAADLAEALYTMPRNNQLSLSLPRSPCSRDRDSNNMSSSAGAVGTGFNPYTGQLAVTVHDHGATGQWNDDDYGRGQSSSVSPRGGGYGSSASTPHSTNGTNGSTYINPPPTSGGGGGGGGGGGSGGGGGNGGNPSNSGPNNGNGGNSGYNGSTMPNTTSAASSVQLTNMNSPTATSHPSLFNSSSRMGTLVTSPFAMNPFALPNCNGQPYATSPLISSSAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00418071;
- 90% Identity
- iTF_01303972; iTF_00972839; iTF_01305333; iTF_01328400; iTF_01346257; iTF_01032669; iTF_00018802; iTF_00135103;
- 80% Identity
- -