Apis002075.1
Basic Information
- Insect
- Acyrthosiphon pisum
- Gene Symbol
- kn
- Assembly
- GCA_005508785.1
- Location
- NC:65977063-66088074[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.9e-240 8.3e-236 783.7 0.2 8 563 36 614 29 622 0.82
Sequence Information
- Coding Sequence
- ATGTTTGGCCTgcaccaccaccatcaccagGATACCACGACACCCGGTGGTATATCTGGACTGCACCATCATCATCACCATCACCACCATCACCAGCTCCGGGGCCCTGTCACAGGGCTCAAAGAAGAACCTTTGGCCAACTCGCAGCTGTCCGTTCCTCGTTCATGGATGCAACCTTCTATCATCGATCAGAGCAGTATCGGCGTGGGAAGGGCACATTTCGAAAAGCAACCACCGAGCAATCTGAGAAAATCCAATTTCTTTCATTTTGTGATCGCACTGTACGACAGGTCTCAGCAGCCAATTGAAATCGAACGGACCGCGTTCATCGGATTCATCGAAAAGGATCAGGAATCCGAGTCACAGAAGACCAACAACGGTATTCAGTATAGACTGCAGCTGTTGTATGCTAACGgtgtGCGACAAGAACAAGACATATACGTGAGGCTCATCGATACCGTTACGAAACAGGCCATCATTTACGAGGGTCAAGACAAGAATCCAGAGATGTGCCGGGTGTTGCTCACGCACGAAGTCATGTGCAGTCGTTGCTGTGATAAGAAAAGTTGCGGTAACAGAAACGAAACACCATCCGATCCGGTCATCATCGACAGattTTTCTTGAAGTTTTTCTTGAAATGcaatcaaaattgtttgaaaaacgCAGGCAATCCCAGGGACATGCGAAGGTTTCAAgtGGTCATTTCGACACAAGTTACGGTTGAAGGTCCCCTGTTGGCCGTATCGGATAACATGTTCGTACACAACAATTCAAAACACGGACGCCGAGCAAAACGTTTAGACCCAAATGACGGCATGTTTTCTCCACTGCCCGTGGCGACACCGTGTATAAAACACATTACACCGAGCGAAGGATGGACCCACGGCGGAGCTTCGGTCACTATATTGGGTGATAATTTTTTCGACGGGTTGCAAGTGGTTTTCGGCAGCAATCTAGTTTGGAGCgaaCTATTGACTCCACACGCCATACAAGTGCAAACACCACCCAGGCCCATACCTGGCATCGTGGAGGTAACGTTGTCGTATAAATCCAAACAGTTTTGCAAAGGATCTCCCGGCAGATTCGCTTACATATCACTCAGCGAACCGACCATCGATTACGGTTTCCAAAGACTACAAAAATTCGTACCCAGATATCCAGGAGATCCCGAAAAGCTACCAAAGGAAGTGATCCTGAAGCGGGCCGCGGATTTGGCGGAAGCACTGTATACGATGCCCCGAAACAATCAGCTGTCACTGTCGCTGCCCAGGTCACCGTGCTCGCGGGACAGGGATGGAAACAACATGTCGACGACGGCGGGGGCCGTGGGCACCGGGTTCAACCCGTACACCGGACAGTTAGCGGTGACGGTTCATGACCACGGTGCAAGTGGTCAATGGAACGACGGTGAGTGCTACGATTACGGACGCGGTCAGAGCAGCAGCGTGTCGCCCCGAGGCGGTGGTTACGGGTCCAGCGCATCGACACCGCACTCGACCAACGGCACGAACGGAAGCACGTACATAAATCCGCCGCCGACCAGTGGAGGAGGCGGTGGCGGaggtggcggtggtggcggaAGTGGAGGTGGTGGCGGAGGCGGCGGAAACCCGTCCAATTCCGGTCCCAACAACGGTAACGGGGGAAATTCCAGTTACAACGGTTCCGCCATGCCCAACACCACGTCGGCTGCGTCGTCTGTTCAGCTGACCAATATGAACTCGCCCACGGCCACCTCGCACCCGTCGCTATTCAACTCTTCCTCgaGAATGGGCACTTTGGTTACATCTCCGTTCGCAATGAATCCGTTTGCTCTACCTAACTGCAACGGACAGCCGTACGCCACAAGCCCGTTAATCAGCTCGTCagcgaaataa
- Protein Sequence
- MFGLHHHHHQDTTTPGGISGLHHHHHHHHHHQLRGPVTGLKEEPLANSQLSVPRSWMQPSIIDQSSIGVGRAHFEKQPPSNLRKSNFFHFVIALYDRSQQPIEIERTAFIGFIEKDQESESQKTNNGIQYRLQLLYANGVRQEQDIYVRLIDTVTKQAIIYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVTVEGPLLAVSDNMFVHNNSKHGRRAKRLDPNDGMFSPLPVATPCIKHITPSEGWTHGGASVTILGDNFFDGLQVVFGSNLVWSELLTPHAIQVQTPPRPIPGIVEVTLSYKSKQFCKGSPGRFAYISLSEPTIDYGFQRLQKFVPRYPGDPEKLPKEVILKRAADLAEALYTMPRNNQLSLSLPRSPCSRDRDGNNMSTTAGAVGTGFNPYTGQLAVTVHDHGASGQWNDGECYDYGRGQSSSVSPRGGGYGSSASTPHSTNGTNGSTYINPPPTSGGGGGGGGGGGGSGGGGGGGGNPSNSGPNNGNGGNSSYNGSAMPNTTSAASSVQLTNMNSPTATSHPSLFNSSSRMGTLVTSPFAMNPFALPNCNGQPYATSPLISSSAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00418071;
- 90% Identity
- iTF_00135944;
- 80% Identity
- -