Sflv010912.1
Basic Information
- Insect
- Sipha flava
- Gene Symbol
- kn
- Assembly
- GCA_003268045.1
- Location
- NW:751575-837162[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.5e-235 4.4e-231 767.7 7.0 7 479 34 505 28 618 0.82
Sequence Information
- Coding Sequence
- ATGTTCGGCCTGCACCACCATCACCAGGAGACCGGTTCGCCCGGCGGCATTTCCGGACTGCACcatcaccaccatcaccaccatcaTCACCAGGTCCGTGGCCCCGTCACAGGGCTCAAAGAAGAACCGCTGGCCAACTCGCAGTTGTCCGTCCCGCGGTCGTGGATGCAGCCGTCCATCATCGATCAAAGCAGtATCGGTGTTGGAAGGGCGCACTTTGAGAAACAACCACCAAGCAATCTAAGGAAATCAAATTTCTTTCATTTTGTGATCGCGCTGTACGACAGGTCTCAGCAGCCGATCGAAATTGAACGGACCGCGTTCATCGGATTCATAGAAAAACCGGAATCCGAGTCGCAGAAGACCAACAACGGTATTCAGTATAGACTACAGCTGTTGTATGCTAATGgtgtACGACAAGAACAAGACATATACGTGAGACTTATCGATACCGTTACCAAACAAgccATCATTTACGAGGGTCAAGACAAGAATCCAGAAATGTGCCGGGTGCTGCTCACGCACGAAGTCATGTGCAGTCGGTGCTGCGATAAGAAAAGCTGTGGCAACAGAAACGAAACGCCATCCGATCCGGTCATCATCGACAGattTTTCCTCAAGTTTTTCTTGAAGTgcaatcaaaattgtttaaaaaacgcTGGCAATCCCAGAGACATGCGAAGGTTTCAAgtGGTCATTTCGACACAAGTCACGGTTGAAGGTCCTCTATTGGCCGTATCGGATAACATGTTTGTACACAACAACTCCAAACACGGTCGCCGAGCAAAACGTTTAGACCCAAACGATGGCATGTTTTCTCCTCTACCCGTAGCCACCCCTTGTATTAAACATATCACGCCGAGCGAAGGATGGACCCACGGTGGAGCTTCGGTTACTATATTGggtgataatttttttgacgGGTTGCAAGTGGTTTTCGGTAGCAATCTAGTCTGGAGCGaaCTATTAACTCCTCATGCCATACAAGTACAAACACCACCCAGACCCATACCAGGTATCGTGGAAGTGACGTTGTCATACAAATCTAAACAGTTTTGCAAAGGATCTCCCGGAAGATTTGcgtatatatCACTGAGTGAACCGACCATCGATTATGGTTTCCAAAGACTACAGAAGTTCGTACCAAGATATCCGGGCGATCCCGAAAAACTGCCAAAGGAAGTGATCCTGAAACGAGCTGCGGACTTGGCGGAAGCTCTGTACACAATGCCCAGAAACAACCAGTTATCGTTGTCATTGCCCAGATCCCCATGTTCTCGTGACAGGGACGGTAACAATATGTCGTCAACGGGATCCGCGGGCACCGGCTTCAATCCGTACACCGGTCAGCTAGCGGTCACCGTGCACGATCACGGAGCAACGGGTCAATGGAATGACGACGACTACGGTCGAGGCCAGAGCAGCAGCGTGTCACCTCGGGGCGGCGGCTACGGGTCCAGCGCATCGACGCCGCACTCGACCAACGGCACGAACGGCGGCAGCACGTACATCAACCCGCCGCCGACCAGCGtgagcggcggcggcggaggcggaggcggcggtggcggcggcggcggaggaggcggcggcggcggcaacggCAACCAGTCCAATTCCGGTCCGAACAACGGGAACGGCGGCAATTACAACGGGTCCTCGATGCCCAACACCACGTCCGCGGCGTCGTCCGTCCAACTGACCAACATGAACTCGCCCACGGCCACCTCGCACCCGTCGCTCTTCAACTCCTCGTCGCgaatGGGCACTCTAGTAACATCTCCATTCGCCATGAATCCCTTTGCACTACCTAACTGCAACGGACAACCTTACGCCACCAGCCCGTTAATCAGCTCGTCagcgaaataa
- Protein Sequence
- MFGLHHHHQETGSPGGISGLHHHHHHHHHHQVRGPVTGLKEEPLANSQLSVPRSWMQPSIIDQSSIGVGRAHFEKQPPSNLRKSNFFHFVIALYDRSQQPIEIERTAFIGFIEKPESESQKTNNGIQYRLQLLYANGVRQEQDIYVRLIDTVTKQAIIYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVTVEGPLLAVSDNMFVHNNSKHGRRAKRLDPNDGMFSPLPVATPCIKHITPSEGWTHGGASVTILGDNFFDGLQVVFGSNLVWSELLTPHAIQVQTPPRPIPGIVEVTLSYKSKQFCKGSPGRFAYISLSEPTIDYGFQRLQKFVPRYPGDPEKLPKEVILKRAADLAEALYTMPRNNQLSLSLPRSPCSRDRDGNNMSSTGSAGTGFNPYTGQLAVTVHDHGATGQWNDDDYGRGQSSSVSPRGGGYGSSASTPHSTNGTNGGSTYINPPPTSVSGGGGGGGGGGGGGGGGGGGGNGNQSNSGPNNGNGGNYNGSSMPNTTSAASSVQLTNMNSPTATSHPSLFNSSSRMGTLVTSPFAMNPFALPNCNGQPYATSPLISSSAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00418071;
- 90% Identity
- iTF_00135944;
- 80% Identity
- -