Msac009809.1
Basic Information
- Insect
- Melanaphis sacchari
- Gene Symbol
- kn
- Assembly
- GCA_002803265.2
- Location
- NW:2046544-2131014[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.3e-239 1.5e-235 782.4 4.5 8 518 36 561 29 620 0.80
Sequence Information
- Coding Sequence
- ATGTTCGGCCTGCACCACCACCATCACCAAGATACCGGAACGCCCGGTGGTATATCCGGACTGCACCATCATCATCACCATCATCACCATCACCAGCTCCGGGGTCCAGTTACCGGGCTCAAAGAAGAACCTTTGGCCAACTCACAGCTGTCCGTTCCCCGTTCATGGATGCAACCCTCCATCATCGATCAGAGCAgtatCGGCGTGGGAAGGGCACATTTTGAAAAGCAACCTCCTAGCAATCTGAgaaaatccaatttttttcatttcgtgATCGCGCTGTACGACAGGTCTCAACAGCCAATTGAAATCGAACGAACTGCGTTCATTGGATTCATCGAAAAGGATCAGGAATCCGAGTCACAGAAGACCAACAACGGTATTCAGTATAGACTTCAGCTGTTGTATGCTAATGgtgtGCGACAAGAACAAGACATATATGTGAGGCTCATCGATACCGTTACCAAACAGGCCATCATTTACGAGGGTCAAGACAAGAATCCAGAGATGTGCCGGGTGCTGCTAACGCACGAAGTCATGTGCagTCGATGCTGTGATAAGAAAAGTTGCGGCAACAGAAACGAAACGCCATCTGATCCAGTCATCATCGACAGatttttcttGAAGTTTTTCTTGAAATGCaatcaaaattgtttgaaaaacgcTGGAAATCCCAGAGACATGCGGAGGTTTCAAgtGGTCATTTCAACACAAGTTACAGTTGAAGGTCCTTTATTAGCTGTATCGGATAACATGTTCGTACACAACAATTCGAAACACGGACGCCGAGCAAAACGTTTAGATCCAAATGACGgtaTGTTTTCTCCTCTACCCGTGGCGACACCATGTATAAAACACATTACACCGAGTGAAGGATGGACGCACGGCGGAGCTTCGGTCACTATATTGGGTGATAATTTTTTCGACGGTTTGCAAGTGGTTTTCGGCAGCAATCTAGTTTGGAGCGAACTATTGACTCCACACGCCATACAAGTGCAAACACCGCCCAGGCCCATACCCGGCATCGTGGAGGTAACGTTGTCATATAAATCCAAACAGTTTTGCAAAGGATCTCCCGGCAGATTCGCGTACATATcaCTCAGCGAACCAACCATCGATTACGGTTTCCAAAGACTACAAAAATTTGTACCCAGATATCCAGGTGATCCCGAAAAACTACCAAagGAAGTGATCCTGAAGCGTGCAGCGGATTTAGCGGAAGCGCTGTACACGATGCCCCGAAACAATCAACTTTCGCTATCACTGCCCAGGTCACCGTGCTCGCGGGACAGGGACAGCAACAACATGTCGTCGTCGGCGGGGGCGGTAGGCACTGGGTTCAACCCGTACACCGGACAGCTAGCGGTGACTGTACACGACCATGGTGCTACTGGTCAATGGAACGACGACGATTACGGACGCGGTCAAAGCAGCAGCGTATCGCCCCGAGGTGGTGGTTACGGGTCCAGCGCATCGACGCCGCATTCAACCAACGGCACGAACGGAAGCACGTACATAAATCCGCCGCCAACCAGTGGCGGAGGTGGTGGCGGTGGTGGAGGTGGAGGTGGTGGaagcggcggcggtggcggagGCGGTGGAAATCCGTCCAATTCCGGTCCCAACAACAGTAACGGGGGAAATTCCGGCTACAACGGTTCCTCCATACCTAACACCACATCGTCCGCGTCGTCCGTTCAACTGACCAACATGAACTCGCCCACGGCCACTTCGCACCCATCACTCTTCAATTCTTCTTCGAGAATGGGCACATTGGTAACATCTCCATTCGCCATGAATCCGTTCGCTCTACCCAACTGCAACGGACAGCCATACGCCACGAGCCCATTAATCAGTTCGTCtgcgaaataa
- Protein Sequence
- MFGLHHHHHQDTGTPGGISGLHHHHHHHHHHQLRGPVTGLKEEPLANSQLSVPRSWMQPSIIDQSSIGVGRAHFEKQPPSNLRKSNFFHFVIALYDRSQQPIEIERTAFIGFIEKDQESESQKTNNGIQYRLQLLYANGVRQEQDIYVRLIDTVTKQAIIYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVTVEGPLLAVSDNMFVHNNSKHGRRAKRLDPNDGMFSPLPVATPCIKHITPSEGWTHGGASVTILGDNFFDGLQVVFGSNLVWSELLTPHAIQVQTPPRPIPGIVEVTLSYKSKQFCKGSPGRFAYISLSEPTIDYGFQRLQKFVPRYPGDPEKLPKEVILKRAADLAEALYTMPRNNQLSLSLPRSPCSRDRDSNNMSSSAGAVGTGFNPYTGQLAVTVHDHGATGQWNDDDYGRGQSSSVSPRGGGYGSSASTPHSTNGTNGSTYINPPPTSGGGGGGGGGGGGGSGGGGGGGGNPSNSGPNNSNGGNSGYNGSSIPNTTSSASSVQLTNMNSPTATSHPSLFNSSSRMGTLVTSPFAMNPFALPNCNGQPYATSPLISSSAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00418071;
- 90% Identity
- iTF_00135944;
- 80% Identity
- -