Sgrm022400.1
Basic Information
- Insect
- Schizaphis graminum
- Gene Symbol
- kn
- Assembly
- GCA_003264975.1
- Location
- QEWZ01001839.1:512307-599603[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-241 2.9e-237 789.2 0.2 8 563 36 611 29 619 0.83
Sequence Information
- Coding Sequence
- ATGTTCGGCTTgcaccaccaccatcaccagGACACCGGAACACCCGGTGGTATATCCGGACTGCACCATCAtcaccaccatcaccaccatCACCAGCTCCGGGGCCCAGTTACCGGGCTCAAAGAAGAACCTTTGGCCAACTCGCAGCTGTCCGTTCCCCGTTCATGGATGCAACCTTCCATCATCGATCAGAGCAGTATCGGCGTGGGAAGAGCACATTTTGAGAAGCAACCTCCCAGCAATCTGAGAAAATCCAATTTCTTTCATTTCGTGATCGCGCTGTACGACAGGTCTCAGCAGCCTATCGAAATCGAACGGACTGCGTTCATCGGATTTATCGAAAAGGATCAGGAATCCGAGTCACAGAAGACCAACAACGGTATTCAGTATAGACTTCAGCTGTTGTATGCTAACGgtgtGCGACAAGAACAAGACATATATGTGAGGCTCATTGATACCGTTACCAAACAGGCCATCATTTACGAGGGTCAAGACAAGAATCCTGAGATGTGCCGGGTGCTGCTAACGCACGAAGTCATGTGCAGTCGATGCTGTGATAAGAAAAGTTGCGGCAACAGAAACGAAACGCCATCCGATCCGGTCATCATCGACAGATTTTTCTTGAAGTTTTTCTTGAAATGCAatcaaaattgtttgaaaaacgCTGGAAATCCCAGAGACATGCGAAGGTTTCAAgtGGTCATTTCAACACAAGTTACGGTTGAAGGTCCTCTATTGGCTGTATCGGATAACATGTTCGTACACAACAATTCAAAACACGGACGCCGAGCAAAACGTTTAGACCCAAATGACGgTATGTTTTCTCCTCTACCCGTGGCGACACCATGTATAAAACACATTACACCGAGCGAAGGATGGACCCACGGCGGAGCTTCGGTCACTATATTGGGTGATAATTTTTTCGACGGGTTGCAAGTGGTTTTCGGCAGCAATCTAGTTTGGAGCGAACTATTGACTCCACACGCCATACAAGTGCAAACGCCGCCCAGGCCCATACCCGGCATCGTAGAAGTAACGCTGTCGTATAAATCCAAACAGTTTTGCAAAGGATCTCCCGGCAGATTCGCGTACATATcacTCAGCGAACCTACCATCGATTACGGTTTTCAAAGACTACAAAAATTTGTACCCAGATATCCAGGTGATCCCGAAAAACTACCAAAGGAAGTGATCCTGAAGCGTGCAGCGGATTTAGCGGAAGCACTATACACGATGCCCCGAAACAATCAGCTTTCGCTATCGCTGCCTAGGTCGCCGTGCTCGCGAGACAGGGACAGCAACAACATGTCGACGTCGGCGGGGGCGGTGGGCACCGGGTTCAACCCGTACACCGGACAACTAGCGGTAACCGTACACGACCACGGTGCTACTGGTCAATGGAACGACGACGATTACGGACGCGGTCAGAGTAGCAGCGTGTCGCCCCGCGGCGGCGGTTACGGGTCCAGCGCATCGACGCCGCATTCGACCAACGGCACAAACGGAAGCACGTACATAAATCCGCCACCAACTagtggtggcggtggcggtggtggtggtggaggCGGTGgaagcggcggcggtggcggaggCGGTGGAAACCCGTCCAATTCCGGTCCCAACAACGGTAACGGAGGAAATTCCGGTTACAACGGTTCCACCATGCCTAACACCACATCGGCCGCGTCGTCCGTTCAACTAACCAACATGAACTCGCCCACGGCCACTTCGCACCCATCACTCTTCAACTCTTCCTCGAGAATGGGCACTTTGGTAACATCACCGTTCGCAATGAATCCGTTTGCTTTACCAAACTGCAACGGGCAGCCGTACGCCACGAGCCCGTTAATCAGCTCGTCAGCGAAATAA
- Protein Sequence
- MFGLHHHHHQDTGTPGGISGLHHHHHHHHHHQLRGPVTGLKEEPLANSQLSVPRSWMQPSIIDQSSIGVGRAHFEKQPPSNLRKSNFFHFVIALYDRSQQPIEIERTAFIGFIEKDQESESQKTNNGIQYRLQLLYANGVRQEQDIYVRLIDTVTKQAIIYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVTVEGPLLAVSDNMFVHNNSKHGRRAKRLDPNDGMFSPLPVATPCIKHITPSEGWTHGGASVTILGDNFFDGLQVVFGSNLVWSELLTPHAIQVQTPPRPIPGIVEVTLSYKSKQFCKGSPGRFAYISLSEPTIDYGFQRLQKFVPRYPGDPEKLPKEVILKRAADLAEALYTMPRNNQLSLSLPRSPCSRDRDSNNMSTSAGAVGTGFNPYTGQLAVTVHDHGATGQWNDDDYGRGQSSSVSPRGGGYGSSASTPHSTNGTNGSTYINPPPTSGGGGGGGGGGGGSGGGGGGGGNPSNSGPNNGNGGNSGYNGSTMPNTTSAASSVQLTNMNSPTATSHPSLFNSSSRMGTLVTSPFAMNPFALPNCNGQPYATSPLISSSAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00418071;
- 90% Identity
- iTF_00135944;
- 80% Identity
- -