Amel006636.1
Basic Information
- Insect
- Anopheles melas
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_000473525.2
- Location
- KI924147.1:1-6426[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.8e-109 5.3e-105 350.8 36.6 1 299 1 295 1 296 0.95 2 2 0.066 5.2e+02 -0.5 3.1 210 246 315 350 298 369 0.60
Sequence Information
- Coding Sequence
- GCCGAGGCACGATTAGCGGCACGGCGCCAGGCCCGTGCGGAGGCCCGCGAGATACGCATGCGCGAGCTGGAGCGGCAGCAGAAGGAGCTGGAGCAGACGGCGGACCGGGTGTTCGACCTGCAGCAGCAGTCGATCGGGCTGTCCGAGCCGGCGACCGCGCTGGTCGCGACGACGCCCCGGTCGAGCCGCATCCTGGCGCAGAATGCGGTGACGCGCGGCAGCGCCCTGTCGTCGCGCCGGAACAGCGAGGACTCGCTGGAGGAGGAAGCCCGCAGCCTGCGCGACCTACGGCACGAGCTGAAGGATGTGGAGGAGCGCTTCCGGAAGGCGATGATTGCGAACGCCCAGCTCGACAACGAGCGGTCCTCGCTCAACTACCAGATACAGCTGCTGAAGGACAAGCTGGAGGAGGTGGAGGAGTCCCACTCGCAGCTGCAGCGCGAGTACCGGGAGAAGTGCCGCGACCGGGAGGCGCTCAAGCGCAACAACGACAAGCTGAGCGAGGAGCTGAAGCTCGTCCAGGGCCAGCTGCAGGAGCGGGACGCACTGATCGAGCAGCACGGGCTGGTCATAGTCACGGTGGAGAACGAGGACGGTACCGATGCGCACCGCGCCCTAGTCACAGCGGATAACGCGCAGCTGCTCAAATCCGTGCCCGGTTCCCTTGACGTAAGACTGAAAAAGTTTGCGGCCGAAAAGCAGGAGCTGCAGACGGAGCTGCAGTCGCTGCAGCAGCAGCTGAACGATATTAAGAGCAAGGGCCGGCGGTACACCTCCATGAACGGTTCGCTCGTCGATGACGATTACGAGGATGCGCAGCGCGAAGCCAACAAGCTGATCACCGAGTATAAATACAAGCTGCAGAAGGCGGAGCAGGAGATCGCGAACCTGCAGGCCAGCCTGGCCCGCTCGGAAACGCAGGTGATCCGGTACAAGAGCACGGCCGAGGCGGCCGAGAAGGCCGAGAGCGATCTGAAGATCGAGCGAAGAAAGCTGCAGCGCGAGAACCGTGAAGCGATGGACCGGCTGGAGGAGCTAGAAACGTCAAACAATCATCTGCTGAAGCGGCTAGACAAGCTTAAGAACGTCAAGAGCAACATCCTGAAGGACATATGA
- Protein Sequence
- AEARLAARRQARAEAREIRMRELERQQKELEQTADRVFDLQQQSIGLSEPATALVATTPRSSRILAQNAVTRGSALSSRRNSEDSLEEEARSLRDLRHELKDVEERFRKAMIANAQLDNERSSLNYQIQLLKDKLEEVEESHSQLQREYREKCRDREALKRNNDKLSEELKLVQGQLQERDALIEQHGLVIVTVENEDGTDAHRALVTADNAQLLKSVPGSLDVRLKKFAAEKQELQTELQSLQQQLNDIKSKGRRYTSMNGSLVDDDYEDAQREANKLITEYKYKLQKAEQEIANLQASLARSETQVIRYKSTAEAAEKAESDLKIERRKLQRENREAMDRLEELETSNNHLLKRLDKLKNVKSNILKDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00097061; iTF_00099656; iTF_00101673; iTF_00105136; iTF_00102359;
- 90% Identity
- iTF_00101673; iTF_00099656; iTF_00105136; iTF_00102359;
- 80% Identity
- -