Acru013306.1
Basic Information
- Insect
- Anopheles cruzii
- Gene Symbol
- lrrfip2
- Assembly
- GCA_943734635.1
- Location
- OX030881.1:5024595-5029822[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-105 1e-101 340.0 36.3 1 299 30 321 30 322 0.90 2 2 0.065 5.1e+02 -0.5 2.4 221 244 351 374 325 396 0.48
Sequence Information
- Coding Sequence
- ATGGAGAGTCCCAGCACCGGGGGTCGTCGTCGTAGTTATTCACGAGTCAATGCAGAGGACCAAGCACTGGATCAAATAGCTAAAGAGGCTGAAGCTCGTTTAGCAGCACGCCGGCAAGCCCGCGCTGAGGCTCGTGAAATTCGTATGCGCGAGCTAGAGCGACAACAAAAGGAACAGGAGCAAAATGCGGATCGCGTATTTGATTTACAGCAACAATCAGTTAATTTATCGGAGACGGCGAACATTAACATGACGTTACGTACGGGTCGGCTGGCAGTACAAACAGCAACAGCTCGTGGAAGTGCATTTTCGTCTCGCCGCAGTAGTGAGGACTCACTCGAGGAAGAGGGCCGTAGTTTGCGTGATTTGCGGCATGAGCTAAAGAACGTAGAGGAACGGTTCCGGAAAGCGATGATTGCTAACGCGCAGTTGGACAACGAGCGGTCGTCGCTCAACTATCAGATACAGTTGCTTAAGGATAAATTGGAGGAGATGGAAGAATTGCAAGCGCAGCTACAGCGAGAGTATCGCGACAAGTGCCGGGATCGTGAAGCTCTTAAGAGGATCAACGATAAATTAATCGAGGAGTTGAAACTCATTAAAGGGCAGCTTTACGATCGCGACTCACTAATTGAGCAGCACGGTCTGGTTATAGTGACGGTGGAGAATGACGATGGAAGTGATGCTAATCGCGCTCTAGTCACAGCAGAGAACGCACAGTTGCTTAAGTCAGTACCCGGTTCGTTAGATATTAGGCTTAAGAAATTTGGAGAAGAGAAACAGGAACTACAAATTGAGGTACAATCGTTGCAACAACAGCTCAATGACATTAAAAACAAAGGACGCCGAAATATCGTCATTAACGGTGCAAGCGATGATGACTACGAGGATGCACAACGTGAAGCAAGTAAACTGGTTACTGAGTATAAATATAAGCTTCAAAAAGCAGAACAGGAGATCGCGAATTTGCAAGCCGGTCTTGCCAGATCAGAGTCACAAGTTATTCGCTACAAAAGCACAGCTGAGGCGGCAGAAAAAGCAGAGAACGATCTTAAGATTGAGCGCAGAAAGTTGCAACGCGAGAACCGTGAAGCTATGGACCGATTGGAAGAACTGGAAACGTCCAACAACCACCTGTTAAAGCGACTAGATAAGTTAAAAAATGCTAAGAGTGCTTTGCTAAAGGATCTATGA
- Protein Sequence
- MESPSTGGRRRSYSRVNAEDQALDQIAKEAEARLAARRQARAEAREIRMRELERQQKEQEQNADRVFDLQQQSVNLSETANINMTLRTGRLAVQTATARGSAFSSRRSSEDSLEEEGRSLRDLRHELKNVEERFRKAMIANAQLDNERSSLNYQIQLLKDKLEEMEELQAQLQREYRDKCRDREALKRINDKLIEELKLIKGQLYDRDSLIEQHGLVIVTVENDDGSDANRALVTAENAQLLKSVPGSLDIRLKKFGEEKQELQIEVQSLQQQLNDIKNKGRRNIVINGASDDDYEDAQREASKLVTEYKYKLQKAEQEIANLQAGLARSESQVIRYKSTAEAAEKAENDLKIERRKLQRENREAMDRLEELETSNNHLLKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00104368;
- 90% Identity
- -
- 80% Identity
- -