Agam006463.1
Basic Information
- Insect
- Anopheles gambiae
- Gene Symbol
- Lrrfip2_1
- Assembly
- GCF_000005575.2
- Location
- NC:3430195-3452324[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.2e-109 4e-105 350.9 37.0 1 299 30 324 30 325 0.95
Sequence Information
- Coding Sequence
- ATGGAGAGCCCGAGTGCCGGCGGCAGGCGTCGCGGCAATTCGCGCATCAATGCCGAAGATCAGGCGCTCGATCAGATCGCAAAGGAGgcCGAGGCACGATTAGCGGCACGGCGCCAGGCCCGTGCGGAGGCCCGCGAGATACGCATGCGCGAGCTGGAGCGGCAGCAGAAGGAGCTGGAGCAGACGGCGGACCGGGTGTTcgatctgcagcagcagtcgaTCGGGCTGTCCGAGCCGGCGACCGCGCTGGTCGCGACGACGCCCCGGTCGAGCCGCATCCTGGCGCAGAATGCGGTGACGCGCGGCAGCGCCCTGTCGTCGCGCCGGAACAGCGAGGACTCGCTGGAGGAGGAAGCCCGCAGCCTTCGCGACCTACGGCACGAGCTGAAGGAAGTGGAGGAGCGCTTCCGGAAGGCGATGATTGCGAACGCCCAGCTCGACAACGAGCGGTCCTCGCTCAACTACCAGATACAGCTGCTGAAGGACAAgctggaggaggtggaggagtcCCACTCGCAGCTGCAGCGCGAGTACCGGGAGAAGTGCCGCGACCGGGAGGCGCTCAAGCGCAACAACGACAAGCTGAGCGAGGAGCTGAAGCTCGTCCAGGGCCAGCTGCAGGAGCGGGACGCACTGATCGAGCAGCACGGGCTGGTCATAGTCACGGTGGAGAACGAGGACGGTACCGATGCGCACCGCGCCCTAGTCACAGCGGATAACGCGCAGCTGCTCAAATCCGTGCCCGGTTCCCTTGACGTAAGACTGAAAAAGTTTGCGGCCGAAAAGCAGGAGCTGCAGACGGAGCTGCAgtcgctgcagcagcagctgaacgATATTAAGAGCAAGGGCCGGCGGTACACCTCCATGAACGGTTCGCTCGTCGATGACGATTACGAGGATGCGCAGCGCGAAGCCAACAAGCTGATCACCGAGTATAAATACAAGCTGCAGAAGGCGGAGCAGGAGATCGCGAACCTGCAGGCCAGCCTGGCCCGCTCGGAAACGCAGGTGATCCGGTACAAGAGCACGGCCGAGGCGGCCGAGAAGGCCGAGAGCGATCTGAAGATCGAGCGAAGAAAGCTGCAGCGCGAGCCAATCATTACGCAATACTGGGACGAGTGTCACTGTCAGTAG
- Protein Sequence
- MESPSAGGRRRGNSRINAEDQALDQIAKEAEARLAARRQARAEAREIRMRELERQQKELEQTADRVFDLQQQSIGLSEPATALVATTPRSSRILAQNAVTRGSALSSRRNSEDSLEEEARSLRDLRHELKEVEERFRKAMIANAQLDNERSSLNYQIQLLKDKLEEVEESHSQLQREYREKCRDREALKRNNDKLSEELKLVQGQLQERDALIEQHGLVIVTVENEDGTDAHRALVTADNAQLLKSVPGSLDVRLKKFAAEKQELQTELQSLQQQLNDIKSKGRRYTSMNGSLVDDDYEDAQREANKLITEYKYKLQKAEQEIANLQASLARSETQVIRYKSTAEAAEKAESDLKIERRKLQREPIITQYWDECHCQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00104368;
- 90% Identity
- iTF_00104368;
- 80% Identity
- -