Amin001732.1
Basic Information
- Insect
- Anopheles minimus
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_000349025.1
- Location
- KB663710.1:1511641-1525396[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-108 1.5e-104 349.0 36.5 1 299 49 341 49 342 0.94 2 2 0.033 4.3e+02 -0.5 2.8 210 246 361 396 345 415 0.60
Sequence Information
- Coding Sequence
- ATGGTGCAGCTTAAACCGCAGCAAAACTCGCTCGCCAGCAAGCTAGTGGTGCAGCATCAGTATGGACCGTCGCTTAGCGACTGTCTCGAGCTGGAAGCTGCCGGTCAACCGAAAGGCCTTGCCGTCAAGGGAACGTGGCGCTACGCCGAGGCGCGATTAGCAGCTAGACGTCAGGCACGTGCAGAGGCTCGTGAAATACGCATGCGAGAACTGGAGCGACAACAGAAAGAGCTGGAGCAAACAGCCGACCGGGTGTTTGATCTGCAGCAGCAGTCGATCGGTCTGTCCGAACCAGCCAACATGGTTGCCACGCCACGCTCGAGCCGCATACTGGCCCAGAACGCAGTGACGCGTGGCAGTGCCCTATCGTCCCGCCGTAACAGTGAGGATTCCTTAGAGGAGGAAGCCCGTAGTCTACGGGATCTTCGGCATGAGCTGAAAGACGTAGAGGAGCGTTTCCGCAAGGCGATGATTGCGAACGCCCAGTTAGACAATGAACGGTCCTCGCTTAACTATCAAATTCAGCTGCTAAAGGATAAGCTGGAGGAGGTGGAAGAGTCGCACTCGCAGCTGCAGCGAGAGTATCGGGAAAAGTGTCGCGACCGGGAAGCGCTCAAGCGCAACAACGACAAACTCAGCGAAGAGTTGAAGCTCGTGCAGGGTCAGCTACAGGAGCGTGATGCACTGATAGAACAGCACGGACTAGTAATAGTAACGGTAGAGAATGAGGATGGTACGGATGCGCACCGCGCTCTAGTCACAGCGGATAACGCACAACTGCTCAAATCTGTTCCCGGCTCGTTAGACGTAAGACTGAAGAAGTTCGCGGCCGAAAAGCACGAGCTGCAGACCGAACTGCAGGcattgcagcagcagctgaaCGATATCAAGAGCAAGGGCAGACGGTACACTTCCATGAACGGTTCGCTCGTTGATGACGATTACGAAGATGCGCAGCGGGAAGCAAACAAGTTGATCACGGAGTATAAATACAAGCTGCAGAAAGCGGAGCAAGAGATCGCAAACCTGCAGGCAAGTCTGGCACGTTCGGAAACGCAGGTGATCCGGTACAAGAGCACGGCCGAGGCGGCAGAGAAAGCGGAAAGCGATCTTAAGATTGAGCGAAGAAAGCTGCAACGCGAGAACCGCGAAGCTATGGATCGTCTGGAAGAGCTAGAAACATCGAACAACCATCTGCTGAAGCGGCTAGACAAACTTAAGAACGTCAAGAGCAACATACTGAAGGATATATGA
- Protein Sequence
- MVQLKPQQNSLASKLVVQHQYGPSLSDCLELEAAGQPKGLAVKGTWRYAEARLAARRQARAEAREIRMRELERQQKELEQTADRVFDLQQQSIGLSEPANMVATPRSSRILAQNAVTRGSALSSRRNSEDSLEEEARSLRDLRHELKDVEERFRKAMIANAQLDNERSSLNYQIQLLKDKLEEVEESHSQLQREYREKCRDREALKRNNDKLSEELKLVQGQLQERDALIEQHGLVIVTVENEDGTDAHRALVTADNAQLLKSVPGSLDVRLKKFAAEKHELQTELQALQQQLNDIKSKGRRYTSMNGSLVDDDYEDAQREANKLITEYKYKLQKAEQEIANLQASLARSETQVIRYKSTAEAAEKAESDLKIERRKLQRENREAMDRLEELETSNNHLLKRLDKLKNVKSNILKDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00104368;
- 90% Identity
- iTF_00104368;
- 80% Identity
- -