Afun013702.1
Basic Information
- Insect
- Anopheles funestus
- Gene Symbol
- Lrrfip2
- Assembly
- None
- Location
- Contig2:3612657-3628194[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-108 1.5e-104 349.2 36.5 1 299 30 322 30 323 0.94 2 2 0.029 4.3e+02 -0.3 2.7 210 246 342 377 326 396 0.60
Sequence Information
- Coding Sequence
- ATGGAGAGTCCGAGTGCCGGTGGGAGGCGCCGCGGCAATTCGCGCATCAATGCGGAAGATCAAGCCCTTGATCAGATTGCAAAGGAGGCCGAGGCACGGTTAGCAGCTAGGCGTCAGGCACGGGCAGAGGCACGCGAGATACGCATGCGAGAACTGGAGCGGCAACAGAAAGAGCTGGAGCAAACGGCCGACCGCGTCTTTGATCTGCAGCAGCAGTCGATCGGTTTGTCCGAACCGGCCAACATGGTTGCGACGCCACGTTCGAGCCGCATACTGGCCCAGAACGCGGTGACGCGTGGTAGTGCCCTATCGTCCCGCCGTAACAGTGAGGATTCCCTAGAGGAGGAAGCCCGCAGCCTACGCGACCTTCGGCATGAGCTGAAAGACGTAGAAGAGCGTTTCCGCAAGGCGATGATTGCGAACGCTCAGCTAGACAATGAACGGTCCTCGCTTAACTATCAAATTCAGCTGCTAAAGGACAAGCTGGAGGAGGTGGAAGAATCGCACTCGCAGCTGCAGCGCGAGTATCGGGAGAAATGTCGCGACCGGGAAGCGCTGAAGCGCAACAACGACAAACTCAGCGAGGAGTTGAAGCTCGTGCAGGGTCAGCTACAGGAGCGTGATGCACTGATAGAGCAGCACGGACTAGTAATAGTAACGGTAGAGAATGAGGATGGTACGGATGCGCACCGCGCCCTAGTCACAGCGGATAACGCACAACTGCTCAAATCTGTTCCCGGCTCATTAGACGTAAGACTGAAGAAGTTTGCGGCCGAAAAGCACGAACTGCAGACCGAACTGCAGGCGCTGCAGCAACAGCTGAACGATATCAAGAGCAAGGGCAGACGGTACACCTCCATGAACGGTTCGCTGGTCGATGATGACTACGAAGATGCGCAGCGGGAAGCTAACAAGCTGATCACGGAGTATAAGTACAAGCTGCAGAAAGCGGAGCAAGAGATCGCAAACCTGCAGGCTAGTCTGGCACGCTCGGAAACGCAGGTGATCCGATACAAGAGCACTGCCGAGGCGGCAGAGAAAGCGGAAAGCGATCTTAAGATCGAGCGAAGAAAGCTGCAACGCGAGAACCGTGAAGCGATGGATCGTTTGGAGGAGCTAGAAACATCGAACAACCACTTGCTGAAGCGGCTAGATAAGCTTAAGAACGTCAAGAGCACCATACTGAAGGACATATGA
- Protein Sequence
- MESPSAGGRRRGNSRINAEDQALDQIAKEAEARLAARRQARAEAREIRMRELERQQKELEQTADRVFDLQQQSIGLSEPANMVATPRSSRILAQNAVTRGSALSSRRNSEDSLEEEARSLRDLRHELKDVEERFRKAMIANAQLDNERSSLNYQIQLLKDKLEEVEESHSQLQREYREKCRDREALKRNNDKLSEELKLVQGQLQERDALIEQHGLVIVTVENEDGTDAHRALVTADNAQLLKSVPGSLDVRLKKFAAEKHELQTELQALQQQLNDIKSKGRRYTSMNGSLVDDDYEDAQREANKLITEYKYKLQKAEQEIANLQASLARSETQVIRYKSTAEAAEKAESDLKIERRKLQRENREAMDRLEELETSNNHLLKRLDKLKNVKSTILKDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00104368;
- 90% Identity
- iTF_00104368;
- 80% Identity
- -