Avir006232.1
Basic Information
- Insect
- Altica viridicyanea
- Gene Symbol
- kn_1
- Assembly
- None
- Location
- GWHAMMQ00000022:1212008-1302050[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.7e-74 8.3e-70 235.7 0.0 6 158 73 215 69 216 0.95 2 2 1.2e-145 2.1e-141 472.1 13.6 182 519 216 557 216 582 0.84
Sequence Information
- Coding Sequence
- ATGACGAGGTCGGACGAGGGACATCCCGTGGAGCGCGGTTATCCAACGGCGTCTCCTTGGCCCGCGCTTTCCCTCACGGCTCACGAACTGGACCCTGTGGCAGCCGCGTGGGGTCGGAAACTCTACCCAGGAACGGGTACATCTAGAGTTGCCGGTCCTGGACTGATGTTCGGTTTGCATCATCATCAAGATGCTACCGGTCTTCATCATCACCATCAACCACGTGGACCTAGCCTTAAAGAAGAACCCTTAACCACTGCCAGATCCTGGATGCAAGGGACTGTATCAGATCAAAATGGATCTCAAGTCGGACGAGCCCATTTTGAGAAACAACCGCCCAGCAATCTTAGAAAATCGAATTTCTTCCACTTTGTCATCGCCTTGTACGACCGAGCCGGTCAGCCAGTGGAAATCGAGCGAACGGCTTTCATCGGGTTCATCGAAAAGGACCAGGAAGCTGATGGTCAAAAAACGAATAATGGAATTCAGTATCGATTACAGTTACTTTTCGCCAATGGTGTTCGACAAGAACAAGATATATACGTTAGATTAATAGACTCCGTTACAAAACAGGCCATAATTTATGAAGGACAGGACAAAAATCCTGAAATGTGCAGGGTGCTACTCACACACGAGATTATGTGCAGATTTTTCCTTAAGTTTTTTCTCAAATGTAACCAAAACTGTCTGAAAAATGCTGGCAATCCTCGAGATATGAGAAGGTTTCAAGTAGTAATAAGTACCCAAGTTGCTGTAGATGGACCACTCTTAGCAATTTCTGATAATATGTTTGTACATAATAACTCAAAACATGGAAGGAGAGCAAAGAGGCTTGACCCTACAGAAGGTTACATCAATATGATGTGCACAGGCCAATTTCCAGGACTCTACCCGCCCTTACCAGTAGCTACCCCCTGTATAAAAGCCATCAGCCCTAGCGAAGGATGGACGGCCGGAGGATCGACAGTTATTATAGTAGGAGATAACTTCTTTGATGGACTACAAGTCGTTTTTGGCACTATGCTTGTTTGGAGCGAGTTGATAACACCTCATGCAATACGAGTCCAAACGCCTCCTAGGCATATACCGGGTGTAGTGGAAGTTACGTTATCGTATAAGTCCAAACAATTTTGTAAAGGAGCACCAGGGAGATTTGTATACGTATCATTAAATGAACCAACAATAGATTATGGATTCCAAAGACTACAAAAGTTAATTCCCAGGCATCCAGGTGATCCTGAAAAACTACCTAAGGAGATAATATTGAAGAGAGCAGCAGACTTGGCAGAGGCCTTATACTCGATGCCCAGGAATAATCAACTGTCCCTTTCAGCACCAAGATCACCAACTATGGGAAATAATGGGATGACATCGACATTCAATGCTTATACGGGTCAACTGGCAGTCAGCGTTCAGGACAACGGAAACGAAGACTACGGGGGGAGGACGCAAAGTAGCAGCGTGTCACCACGTGGTGGTGGTTACTGTTCCAATGCATCGACACCTCATTCATCAAACGGTGGCGGTTCTTATGCTGGAGGCAGTACAGGAAACATTAACGGTGGTTATGGTGGCGCTACTCCTACAAGTACTACACCACAACTGTCAAATATGTTACCAGCTTCACCTTCAGCAGGGATTTTCAATACTACTCCAAGAATGAGTCTAGTCTCCTCTCCCTTTGCATCAATGAATCCATTCGCCCTACCAACGTGCAATTCACAGGGTTACGGCTCATCAGCTGCCCTAGTGGGCAGTAAGTAG
- Protein Sequence
- MTRSDEGHPVERGYPTASPWPALSLTAHELDPVAAAWGRKLYPGTGTSRVAGPGLMFGLHHHQDATGLHHHHQPRGPSLKEEPLTTARSWMQGTVSDQNGSQVGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPVEIERTAFIGFIEKDQEADGQKTNNGIQYRLQLLFANGVRQEQDIYVRLIDSVTKQAIIYEGQDKNPEMCRVLLTHEIMCRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGYINMMCTGQFPGLYPPLPVATPCIKAISPSEGWTAGGSTVIIVGDNFFDGLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLSLSAPRSPTMGNNGMTSTFNAYTGQLAVSVQDNGNEDYGGRTQSSSVSPRGGGYCSNASTPHSSNGGGSYAGGSTGNINGGYGGATPTSTTPQLSNMLPASPSAGIFNTTPRMSLVSSPFASMNPFALPTCNSQGYGSSAALVGSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01351436; iTF_01307028; iTF_01479860; iTF_01479909; iTF_00986870; iTF_00986920; iTF_00110327; iTF_01121367; iTF_00431228; iTF_00431271; iTF_01121366; iTF_01344700; iTF_00395039; iTF_00853736;
- 90% Identity
- -
- 80% Identity
- -