Osur011176.1
Basic Information
- Insect
- Oryzaephilus surinamensis
- Gene Symbol
- kn
- Assembly
- GCA_004796505.1
- Location
- SSSI01002985.1:27954-52458[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.4e-253 7.8e-249 826.9 24.0 6 565 19 584 15 595 0.86
Sequence Information
- Coding Sequence
- ATGTTCGGTTTGCACCATCATCAGGATGCCACCGCCGGTCTGCATCATCACCATCAGCCACGTGGTCCAAGTCTTAAGGAGGAACCATTGTCGGCGGCGCGTTCATGGATGCAATCAACTGTTGCCGATCAAAACGgTTCAACAGTTGGTCGAGCCCATTTCGAGAAACAACCCCCGAGCAACTTGCGAAAGTCgaatttctttcattttgtTATTGCTTTATATGACAGGGCCGGTCAGCCAGTGGAAATTGAAAGGACAGCATTCATTGGCTTTATCGAAAAGGACCAGgAAGCTGATGGACAAAAGACAAATAATGGCATCCAATACAGACTGCAATTATTATTTGCGAATGgTGTTCGACAAGAACAAGATATTTACGTTAGACTTATCGATTCTGTAACAAAACAAGCCATAATTTATGAAGGACAAGATAAGAACCCTGAAATGTGCAGGGTGCTACTAACACACGAAATAATGTGCAGtCGCTGTTGTGACAAGAAAAGTTGTGGTAATCGTAATGAAACCCCTTCAGATCCTGTGATAATTGACAGatttttcttgaaattctTTTTGAAATGTAATCAGAACTGTCTTAAAAATGCTGGAAATCCAAGAGATATGCGCCGATTTCAAGTGGTTATATCGACACAAGTGGCGGTGGATGGACCGTTGTTGGCCATTTCGGATAATATgtttgtacataataattcGAAACATGGCAGAAGAGCAAAACGACTCGATCCAACCGAAGGTCAATTTCCAGGACTGTATCCACCCCTGCCGGTTGCAACGCCCTGTATTAAAGCCATCAGTCCAAGTGAAGGATGGACAGCAGGTGGATCAACAGTTATAATAGTTggtgataatttttttgatgGTTTACAAGTTGTTTTCGGTACAATGTTGGTGTGGAGTGagTTAATTACACCGCATGCCATCAGGGTGCAAACACCTCCCAGACATATACCGGGTGTTGTCGAAGTGACGCTCTCTTACAAATCGAAACAGTTTTGTAAAGGAGCACCCGGTCGATTTGTATACGTATCTTTAAATGAACCAACGATAGATTACGGTTTCCAAAGATTACAAAAACTAATACCACGCCATCCTGGTGACCCGGAAAAACTTccaaaaGAGATTATATTGAAGAGGGCAGCAGATTTAGCGGAAGCATTATATTCAATGCCAAGAAACAATCAATTATCGTTATCGGCACCGCGTTCACCCACAATGGGCAACAATGGAATGTCGTCAACATTTAATGCATACACTGGTCAGCTGGCGGTCAGCGTTCAAGACAACGGAAACGGTCAGTGGACAGAAGAGGAGTACGGCCGGACGCAAAGTAGCAGCGTATCACCACGTGGCGGCGGCTATTGCTCAAATGCGTCCACGCCGCATTCGTCGAATGGTGGTTCGTATGGCAGTAATATGAATGGATATGGTGGAGCAACGCCGACAAGTACTTCACAATTGTCCAATATGTTGCCCAGTTCACCGTCAACGGGCATTTTTAATTCAACACCAatTGCACCTGAAGCGAGTCATTATCATTTCGGCACAAACTACAATAAagcgtcgtcgtcgtcgtcgtcgacAAATGAAGCGACGACGACGACGCCGACAACAGTGGCGGCGGCGGCAGTTGCTGCTGCCTCCACTTGTTGTTCAACATCGGCGACGGACAAAGAGAAAAGCGCGTTCGCCCCTGTGATACGGGGGCCAGAAACGCCACCCCCATATCACCAACAAGCGGCGCCCGCGCTTTTCCACCACCAGCCTCTCAGTGGTTGGCACCACTTGGTTGTGCAATgttag
- Protein Sequence
- MFGLHHHQDATAGLHHHHQPRGPSLKEEPLSAARSWMQSTVADQNGSTVGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPVEIERTAFIGFIEKDQEADGQKTNNGIQYRLQLLFANGVRQEQDIYVRLIDSVTKQAIIYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGQFPGLYPPLPVATPCIKAISPSEGWTAGGSTVIIVGDNFFDGLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLSLSAPRSPTMGNNGMSSTFNAYTGQLAVSVQDNGNGQWTEEEYGRTQSSSVSPRGGGYCSNASTPHSSNGGSYGSNMNGYGGATPTSTSQLSNMLPSSPSTGIFNSTPIAPEASHYHFGTNYNKASSSSSSTNEATTTTPTTVAAAAVAAASTCCSTSATDKEKSAFAPVIRGPETPPPYHQQAAPALFHHQPLSGWHHLVVQC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00056333;
- 90% Identity
- iTF_01098232;
- 80% Identity
- -