Basic Information

Gene Symbol
kn
Assembly
GCA_028455855.1
Location
JAPTHL010000008.1:4871296-4901193[-]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 5.2e-32 3.5e-28 97.8 0.0 6 94 18 96 14 96 0.91
2 3 1.7e-15 1.1e-11 43.3 0.2 133 158 95 120 94 121 0.95
3 3 8.1e-149 5.5e-145 483.5 15.9 182 516 121 457 121 481 0.84

Sequence Information

Coding Sequence
ATGTTCGGCTTACACCATCATCAGGATGCTACAGGCCTCCACCATCACCATCAACCACGTGGACCAAGTCTCAAAGAGGAACCACTCACTACGACCAGATCATGGATGCAACCCACTGTTCCCGATCAAAATGGgattggtgttGGACGAGCACATTTTGAAAAACAACCACCAAGTAATTTACGAAAATCGAATTTTTTCCATTTTGTGATCGCATTATATGATCGAGCTGGACAGCCTGTGGAAATCGAAAGGACGGCTTTTATAGGATTTATTGAAAAGGATCAGGCTATCGTATACGAAGGACAAGATAAGAATCCTGAAATGTGTCGAGTTCTATTGACACATGAAATTATGTGCAGATTTTTTCTCAAATTCTTCCTGAAATGCAATCAAAATTGTTTAAAGAATGCCGGAAATCCAAGGGATATGCGAAGATTCCAAGTTGTCATTGCAACACAGGTGTCTGTAGATGGTCCATTACTTGCCATTTCGGACAATATGTTCGTTCATAATAATTCAAAGCATGGAAGAAGAGCAAAACGACTCGACCCAACAGAAGGTCACTTTCCAGGATTATATCCACCATTACCTGTGGCAACACCTTGTATAAAAGCGATCAGTCCGAGTGAAGGCTGGACGTCAGGCGGTTCAACAGTTATCATAGTTGGTGATAATTTTTTTGATGGCCTTCAAGTTGTTTTTGGAACAATGTTAGTTTGGAGTGAACTCATAACACCTCACGCGATACGAGTTCAAACACCACCAAGACATATTCCTGGGGTTGTAGAAGTCACATTATCATATAAATCAAAACAGTTCTGTAAAGGAGCACCAGGCAGATTTGTGTATGTTTCTTTAAATGAACCAACAATCGATTATGGTTTTCAGCGATTACAAAAACTAATACCACGGCATCCAGGTGATCCAGAAAAATTACCAAAGGAGATTATTTTGAAAAGGGCAGCCGATTTAGCTGAAGCATTGTATACAATGCCGCGGAATAATCAATTGTCGTTATCAGCACCAAGATCACCTACAATGAGTAATAATGGAATGACATCGACATTCAATACGTATACGGGACAACTGGCTGTCAGCGTGCAAGACAACGGAAACGGTCAGTGGACAGAAGAGGAGTATGGGAGGACACAGAGTAGCAGTGTATCGCCACGTGGTGGCGGCTACTGTTCTAGTGCATCTACCCCACATTCATCTAACGGCGGTGGTTCATACGGTGGCAACATGAATGGATATGGAGGTGCCACCCCAACTAGTACATCACAATTATCTAACATGTTGCCTAGTTCACCGTCGGCTGGTATTTTCAATTCTACACCACGAATGGGTTTAGTATCATCACCATTTGCATCAATGAATCCATTCGCATTACCAACATGCAATTCACAAAGTTATAGTTCAACTCCACTTGTTGGTACAACTAAATAG
Protein Sequence
MFGLHHHQDATGLHHHHQPRGPSLKEEPLTTTRSWMQPTVPDQNGIGVGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPVEIERTAFIGFIEKDQAIVYEGQDKNPEMCRVLLTHEIMCRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVIATQVSVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGHFPGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYTMPRNNQLSLSAPRSPTMSNNGMTSTFNTYTGQLAVSVQDNGNGQWTEEEYGRTQSSSVSPRGGGYCSSASTPHSSNGGGSYGGNMNGYGGATPTSTSQLSNMLPSSPSAGIFNSTPRMGLVSSPFASMNPFALPTCNSQSYSSTPLVGTTK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00056333;
90% Identity
iTF_00986870;
80% Identity
iTF_00986870;