Sory000418.1
Basic Information
- Insect
- Sitophilus oryzae
- Gene Symbol
- kn
- Assembly
- GCA_002938485.2
- Location
- NW:1077440-1321396[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.6e-244 5.1e-240 797.4 19.8 8 519 23 515 17 542 0.87
Sequence Information
- Coding Sequence
- ATGTTCGGCCTGCACCACCACCACCAGGACACGGCTGGTACGGGAGGGCTGCACCACCATCAGCCCAGGGGACCCAGTCTCAAAGAGGAACCGCTGACGAGGGGCTGGATGCAGGGAGGTGTGGCCGATCAGAATGGatCGACTGTGGGACGAGCCCATTTCGAAAAACAGCCGCCATCAAACTTAAGAAAATCCAACTTCTTCCATTTCGTCATCGCCCTCTACGATAGGGGAGGACAGCCAATAGAAATCGAACGAACCGCATTCATCGGTTTCATCGAAAAAGACCAGGAAGCAGATGGCCAAAAAACAAATAACGGTATTCAATACAGATTGCAACTTCTTTTCGCAAATGGAATCAGGCAAGAACAGGATATCTACGTCAGGCTTATCGATTCGGTAACGAAACAGGCTATTATCTATGAAGGTCAAGATAAGAACCCTGAGATGTGCCGCGTACTTCTCACACACGAAATTATGTGCAGCCGGTGTTGTGACAAAAAGAGCTGCGGCAACCGCAACGAAACCCCTTCAGATCCTGTGATAATTGATAGATTCTTCTTAAAATTCTTCCTAAAGTGCAATCAAAATTGCCTGAAAAATGCGGGCAACCCTAGAGATATGAGAAGATTTCAGgtGGTTATATCAACACAAGTGGCAGTGGACGGACCTTTATTGGCTATATCAGACAACATGTTTGTACATAACAACTCCAAACATGGAAGGAGAGCAAAAAGATTAGACCCGACAGAAGGGCTCTACCCACCCCTGCCAGTCGCAACGCCCTGTATAAAAGCTATCAGCCCCAGTGAAGGATGGACAGCTGGAGGATCGACGGTCATCATCGTTGGAGACAATTTCTTCGACGGTCTACAAGTCGTTTTTGGAACAATGCTAGTTTGGAGCGAAcTTATCACGCCCCATGCAATTAGAGTACAAACTCCACCCAGACACATACCTGGTGTTGTAGAAGTAACGTTATCGTACAAATCGAAGCAGTTTTGTAAAGGTGCCCCTGGACGATTTGTTTATGTTTCACTAAACGAACCAACAATCGATTACGGATTCCAACGACTCCAAAAACTAATACCGCGACATCCAGGCGATCCAGAAAAGCTTCCTAAAGAGATTATCCTGAAAAGAGCGGCCGATCTGGCAGAGGCTCTTTATTCGATGCCCAGGAACAATCAGCTGTCGCTGTCCGCTCCCAGGTCGCCGACGATGGGCAACAACGGCATGGCCACGTCGTTCAACGCGTACACTGGACAATTGGCGGTCAGTGTACAGGACACTGGAAACGATGAGTACGCGCGCGCGCAAAGCAGCAGCGTCAGCCCGAGGGGTGGCGGCTACTGCTCCAACGCGTCCACTCCTCACTCCTCCAACGGTGGCGGCAGCTACGTGGGCGGCAGCGGGAGCGGGGGCGGCGGAAGTCAGATGAACGGGTACGGAGGGGCGACTCCCACGAGCACCTCGATGGGCAACATGCTGCCGGGCAGTCCGTCGGGGGGAATTTTCAATTCAACTCCTAGAATGTCACTTGTGTCGTCACCTTTCGCCTCTATGAACCCGTTCGCATTACCCACATGTAACGCCCAAGCCTATGGTTCGGCTGCTCTCGTAGGACCAACGAAATAA
- Protein Sequence
- MFGLHHHHQDTAGTGGLHHHQPRGPSLKEEPLTRGWMQGGVADQNGSTVGRAHFEKQPPSNLRKSNFFHFVIALYDRGGQPIEIERTAFIGFIEKDQEADGQKTNNGIQYRLQLLFANGIRQEQDIYVRLIDSVTKQAIIYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGLYPPLPVATPCIKAISPSEGWTAGGSTVIIVGDNFFDGLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLSLSAPRSPTMGNNGMATSFNAYTGQLAVSVQDTGNDEYARAQSSSVSPRGGGYCSNASTPHSSNGGGSYVGGSGSGGGGSQMNGYGGATPTSTSMGNMLPGSPSGGIFNSTPRMSLVSSPFASMNPFALPTCNAQAYGSAALVGPTK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00056333;
- 90% Identity
- iTF_01307028; iTF_00431228; iTF_00431271;
- 80% Identity
- -