Tcas011609.1
Basic Information
- Insect
- Tribolium castaneum
- Gene Symbol
- kn
- Assembly
- GCA_000002335.3
- Location
- NC:13527915-13583120[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.7e-251 2.1e-247 821.6 14.4 6 562 18 544 14 551 0.90
Sequence Information
- Coding Sequence
- ATGTTCGGCTTGCACCACCACCAGGATGCCACGGGCCTGCACCATCACCACCAGCCGCGCGGGCCCAGTCTCAAGGAGGAGCCGCTCTCCACGGCGCGCTCCTGGATGCAGCCCACCGTGCCGGATCAGACCGGGATTGGCGTGGGGAGGGCGCACTTCGAGAAACAGCCTCCCAGCAACTTGCGAAAGTCCAATTTCTTCCATTTCGTCATCGCTTTGTATGACCGAGCGGGACAACCCGTGGAAATCGAAAGGACGGCTTTCATCGGATTTATCGAGAAGGATCAGGAGGCCGACGGCCAGAAAACGAACAATGGAATACAGTATAGGCTGCAGTTACTCTACGCCAGCGGTGTGCGACAAGAGCAGGATATCTACGTGAGACTCATCGACTCCGTCACCAAACAAGCCATAGTATACGAGGGACAAGACAAAAATCCCGAAATGTGCCGAGTGCTTCTGACGCACGAAATCATGTGCAGCCGTTGCTGCGACAAGAAGAGTTGCGGGAACAGGAACGAAACACCATCAGACCCTGTGATAATAGACAGATTCTTTCTCAAGTTCTTCTTAAAGTGCAATCAAAACTGTCTGAAAAATGCCGGCAATCCCAGAGACATGAGACGGTTTCAAGTCGTCATAGCGACGCAGGTGTCCGTCGATGGACCTCTGCTCGCCATCTCCGACAACATGTTCGTGCACAACAACTCCAAGCACGGCAGAAGGGCGAAAAGGCTCGATCCCACCGAAGGTCAATTTCCAGGCCTCTACCCGCCGCTGCCCGTGGCCACCCCCTGCATAAAGGCCATAAGTCCGAGCGAGGGCTGGACGTCAGGCGGATCGACTGTTATCATAGTCGGGGATAATTTCTTCGACGGCCTTCAAGTGGTTTTCGGGACGATGTTGGTTTGGAGCGAATTGATAACACCCCACGCCATTCGAGTTCAAACACCCCCAAGACATATTCCAGGAGTGGTCGAGGTCACATTATCATATAAATCAAAACAATTCTGTAAAGGAGCGCCAGGCAGATTCGTCTATGTTTCCCTAAACGAACCAACGATAGACTACGGATTTCAGAGGCTACAAAAGCTCATTCCCAGGCATCCCGGAGATCCAGAAAAGTTACCAAAGGAAATTATTCTAAAACGAGCAGCGGACTTGGCTGAAGCTCTCTACACCATGCCGAGAAATAATCAGTTATCGTTATCAGCGCCAAGGTCACCCACGATGGCAAATAACGGAATGACGTCCACTTTTAACACGTATACGGGGCAACTGGCTGTCAGCGTTCAGGACAACGGAAACGAGGAGTACGGGAGGGCGCAAAGTAGCAGCGTTTCGCCGCGTGGTGGAGGCTACTGTTCGAGCGCATCAACGCCCCATTCGTCCAACGGAGGCTCCTATGGAGGCAACATGAACGGATACGGGGGCGCGACCCCCACAAGCAGCGCGCAACTGTCCAACATGCTGCCCAGCTCGCCTTCGGCCGGAATTTTCAATTCCACCCCAATTGCATCCGAGGCGGGTCATTATCATTTTGGCGCACACAACAGTAAAGCGGCGGCGGCGTCGGATAAAGAGAAAAGCGCGTTTGCCCCTGTGATACGGGGGAGTTTGACTCCCCCAACTCACCCCCCGGCACCCGCGCTTTTCCACCACCAGCCCGTCACTGGCTGGCACCACTTGGCTGTGCAGTGA
- Protein Sequence
- MFGLHHHQDATGLHHHHQPRGPSLKEEPLSTARSWMQPTVPDQTGIGVGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPVEIERTAFIGFIEKDQEADGQKTNNGIQYRLQLLYASGVRQEQDIYVRLIDSVTKQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVIATQVSVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGQFPGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYTMPRNNQLSLSAPRSPTMANNGMTSTFNTYTGQLAVSVQDNGNEEYGRAQSSSVSPRGGGYCSSASTPHSSNGGSYGGNMNGYGGATPTSSAQLSNMLPSSPSAGIFNSTPIASEAGHYHFGAHNSKAAAASDKEKSAFAPVIRGSLTPPTHPPAPALFHHQPVTGWHHLAVQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00056333;
- 90% Identity
- iTF_01098232;
- 80% Identity
- iTF_01479860;