Basic Information

Gene Symbol
kn
Assembly
GCA_014462685.1
Location
JAACXV010000354.1:222802-365348[-]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 7e-247 1.6e-242 806.4 16.1 8 561 20 539 14 552 0.89

Sequence Information

Coding Sequence
ATGTTTGGCCTCCACCATCACCAAGATGCCAGCACGGGGCTGCACCATCACCAGCCCCGAGGCCCCAGCCTCAAGGAGGAACCGCTAGCCCGAGGATGGATGCAAGGAGGTGTCACCGATCAAAATGGCTCCACCGTGGGTCGGGCCCATTTTGAGAAACAACCGCCATCGAACCTAAGAAAATCCAACTTCTTCCACTTCGTCATAGCCCTCTACGATAGGGGAGGGCAACCAATAGAAATTGAGCGGACGGCTTTCATAGGATTCATCGAAAAAGATCAgGAAGCAGATGGTCAAAAAACCAACAACGGCATTCAGTATAGGCTTCAACTTTTATTTGCAAATGGAATCAGACAAGAGCAGGATATATACGTCAGACTTATCGATTCAGTGACCAAGCAGGCTATCATCTATGAAGGACAAGATAAAAATCCAGAAATGTGTAGGGTGCTTTTAACTCATGAGATTATGTGCAGtcGATGTTGTGACAAAAAAAGTTGCGGAAACCGCAACGAAACCCCTTCAGACCCTGTGATAATTGATAGATTCTTCTTAAAATTCTTTCTCAAGTGCAATCAGAACTGTTTGAAGAACGCAGGAAATCCAAGAGACATGAGAAGATTTCaggTGGTTATATCAACGCAAGTAGCAGTAGATGGTCCTTTATTGGCCATATCAGATAATATGTTCGTACACAACAACTCCAAACATGGTAGAAGAGCAAAACGACTGGACCCAACTGaagGTCAATTTCCAGGACTGTACCCACCCCTACCCGTAGCCACGCCTTGTATCAAAGCCATTAGCCCCAGCGAGGGATGGACAGCTGGAGGATCGACGGTCATCATTGTAGGAGACAACTTCTTCGACGGATTGCAAGTTGTCTTCGGGACTATGTTGGTTTGGAGTGAAttaatcaCACCACATGCCATCAGAGTACAAACCCCTCCGAGACATATACCTGGTGTTGTTGAAGTTACGTTATCTTATAAGTCAAAACAGTTCTGTAAAGGCGCACCTGGACGATTTGTATATGTTTCTTTAAACGAACCAACCATCGACTACGGCTTTCAACGTCTACAAAAGCTCATACCCAGACATCCTGGAGATCCGGAAAAGCTTCCGAAGGAAATCATACTCAAACGAGCTGCAGACCTAGCGGAGGCTCTATACTCGATGCCCAGAAACAACCAGCTGTCATTATCAGCGCCTAGATCACCAACCATGGGCAATAATGGAATGGCGACATCGTTTAACGCGTACACTGGTCAGTTGGCTGTCAGTGTACAGGATACAGGAAACGATGACTACACGAGAGCACAGAGCAGCAGCGTCAGCCCAAGGGGCGGGGGTTACTGCTCCAACGCGTCCACGCCTCACTCGTCAAACGGCGGCAGCTATGGAGGTGGCGGTGGCAGTCAAATGAACGGATACGGTGGCGCAACACCTACCAGTACCACCATGGGTAATATGTTACCGGGCAGTCCGTCGGGAGGTGGAATATTCAATTCAACGCCAAcTTGCACGGAATCTTATTATAAGAGCACAAATAGCAGTAATTTCGATAAAGAGAAAAGCGCTTTCGCTCCCGTTTATAAAGGATCGGATTCGCCCAGTTACCCTCCCGCCCCGTCATTGTTTCACCACCAGAACGTAACAGGCTGGCATCATCTAGCTGTCCAATAA
Protein Sequence
MFGLHHHQDASTGLHHHQPRGPSLKEEPLARGWMQGGVTDQNGSTVGRAHFEKQPPSNLRKSNFFHFVIALYDRGGQPIEIERTAFIGFIEKDQEADGQKTNNGIQYRLQLLFANGIRQEQDIYVRLIDSVTKQAIIYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGQFPGLYPPLPVATPCIKAISPSEGWTAGGSTVIIVGDNFFDGLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLSLSAPRSPTMGNNGMATSFNAYTGQLAVSVQDTGNDDYTRAQSSSVSPRGGGYCSNASTPHSSNGGSYGGGGGSQMNGYGGATPTSTTMGNMLPGSPSGGGIFNSTPTCTESYYKSTNSSNFDKEKSAFAPVYKGSDSPSYPPAPSLFHHQNVTGWHHLAVQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00056333;
90% Identity
iTF_01351436;
80% Identity
-