Aaes020911.1
Basic Information
- Insect
- Alsophila aescularia
- Gene Symbol
- lrrfip2
- Assembly
- GCA_946251895.1
- Location
- CAMIUG010000931.1:18803-33427[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.3e-73 2.6e-68 231.5 25.1 1 297 3 284 3 286 0.90 2 2 1 3.6e+04 -5.8 16.2 1 49 283 330 283 357 0.65
Sequence Information
- Coding Sequence
- ATGCAGGCGGAACAGCGGCTAGCGGCGCGGCGAGCGGCGCGGGCGGAGGCGCGCGAGATACGCATGCGCGAGCTGGAGCGGCAGCAGCGCGAGCAAGAGGACCATGCCGACAAGGCGTATGACATGTATGCAGAGACAGTCGGGCGGCGCGGCGGCACGCGGCTGGCGGCGCTCAGCCCCGCCGCCAGCCTGGTGCACTCGCCCAGGAGGAGCTCCGAGGATTCGGCGGACGACACCTTTAACATTAAGGATCTAAGGCACGAGCTGAAGGAAGTGGAGGAGAAGTTCCGCAAGGCGATGATCCTGAACGCGCAGCTGGACAACGACAAGGCGGCGCTGCACTACCAGCTGGAGCTGCTCAAGGACCGCATCCTGGAGCTGCAGCAGGAACACGCACAACTGCAGCGGGAGCACCGGGAGAAGTGCTCGGCACACGAGCGGCTGAAGCGCGAGCACGTGGCACTGGAGCGCGAGCTGGTGGGCGCGCGGGACGCCGTGCGAGCGCGGGACTCCGCCGCTGCCGCCGCGGGGTTCGCGTTCGCGGAAGCCGCGCCCGGCGCCGCGCACGCCGAAGGGTTCGGCTGCGTGCCGCCGCTGGCGCTGCTGTCGCACGAGCAGGAGCGCGCGCTTGGCGAGGAGGGCACGCTGGACGTGCGGTTGCAGAAGCTGGTGACGGCGAAGCAGCAGCTCGAGTCGGAAGTGCGGAAGCTGAAGCTGACGCTCAACGAGGAGCGCGCGGCGCGGCAGAACGGGGTCTCCAGCCGGCACGACGCCGAGTACGAGAACGAACTGGAAAGTCTCCGCAAGTCGGTGTCGGAGGCGAAGGGGCGCGCGGCGCGCGCGGAGGCCGAGGCGGCGCTGCAGGCCGCCGGCGTCGCGCGGCTGGAGGCGCAGCTGCAGCGCCTGCGCGCGCGGCAGGACCAGCGCGACGAACAAGAGGAGCAGCTGAAGCAGGAGCGCCGCAAGCTGCAGCGGGAGGCAAGAGAAGCACTGAACCGAGTGGAAGAGTTGGAAACGGAGAACAGTCACCTCACGAAACGACTGGACAAGCTCAAGAACGCCAAGTCCGCGCTGCTGAAGGACCTGTGA
- Protein Sequence
- MQAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVGRRGGTRLAALSPAASLVHSPRRSSEDSADDTFNIKDLRHELKEVEEKFRKAMILNAQLDNDKAALHYQLELLKDRILELQQEHAQLQREHREKCSAHERLKREHVALERELVGARDAVRARDSAAAAAGFAFAEAAPGAAHAEGFGCVPPLALLSHEQERALGEEGTLDVRLQKLVTAKQQLESEVRKLKLTLNEERAARQNGVSSRHDAEYENELESLRKSVSEAKGRAARAEAEAALQAAGVARLEAQLQRLRARQDQRDEQEEQLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00791215; iTF_00825756; iTF_00044521; iTF_00826985;
- 90% Identity
- iTF_00826985;
- 80% Identity
- -