Hpun016051.2
Basic Information
- Insect
- Hypomecis punctinalis
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_949316475.1
- Location
- OX438803.1:3168676-3176461[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7e-74 6.6e-70 237.2 24.2 1 297 43 326 43 329 0.89 2 2 0.45 1.1e+04 -3.2 9.7 128 170 349 391 333 403 0.46
Sequence Information
- Coding Sequence
- ATGCAGACACGTATTATGCATTTTAAACTTCTTCAGGAAGCGATGCTGTGTATTTTGGCCAATGATTTAAAAGTTCATTCTACCTCGATGATCTGGGAAGACGAGTTTTCCAATCTCATAGTAGACGCGGAGCAACGGttggcggcgcggcgcgcggcgcgggcggagGCGCGCGAGATCCGCATGCGCGAGCTGGAGCGGCAGCAGCGCGAGCAGGAGGACCATGCCGACAAGGCCTACGACATGTATGCAGAAACGGTGGGCCGTCGCGGCGGCACGCGGCTGGCCGCGCTCAGCCCCGCGGCCGCGCTCACACACTCGCCGCGCCGGAGCTCCGAGGACTCCGCCGACGACACCTTTAATATTAAGGACTTAAGGCACGAAATGAAAGAGGTGGAAGAGAAGTTCCGCAAGGCGATGATATTGAACGCGCAGCTGGACAACGACAAGGCGGCGCTACACTACCAGCTGGAACTGCTCAAAGATAGAATCCTGGAGCTTCAGGAGGAATACGCGCAGTTACAGCGCGAACACCGCGAGAAGTGCTCGGCGCACGAGCGGCTGCGCCGCGAGCACGCGTCCACGGAGCGCGAGCTGGGCTGCGCGCGGGACGCGGTGCGCGCGCGAGACGCGGCCGCGGCCGCCGCCGGGTTCGCGTTCGCCGAGGCCGCGGCCGGCGCCACGCACGCCGAGGGCTTCGGCGCCGTGCCGCCGCTCGCGCTGCTCTCGCACGACCAGGAGCGCGCGCTCGCCGAGAGCGGGGACGGCACGCTCGACGTGCGGTTGCAGAAGCTGGTGAGCGCGAAGACAGCCCTGGAGTCGGAGGTCCGCAAGCTGAAGCTCACGCTGAACGAGGAGCGCGCCGCGCGCCAGAACGGCGTCTCCAACCAGCACGACGCTGACTACGAGAGCGAATTGGAAACGCTGCGCAAGTGCGTGTCGGAGGCGAAGGGTcgcgcggcgcgggcggagGCCGAGGCCGCGCTGCAGGCGGCCGGCGTGGCGCGCCTCGAGGCGCAGCTGCAGCGGCTGCGCGCGCGCCAAGACGCCACCGACGAGCGCGAGGAGCAGCTCAAGCAGGAGCGCCGCAAGCTGCAGCGGGAGGCGCGAGAGGCTCTCAACCGGGTGGAGGAGTTGGAGACGGAGAACAGCCACCTCACCAAGCGGCTCGACAAGCTAAAGAACGCCAAATCCGCGCTGCTCAAGGAGCTGTGA
- Protein Sequence
- MQTRIMHFKLLQEAMLCILANDLKVHSTSMIWEDEFSNLIVDAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVGRRGGTRLAALSPAAALTHSPRRSSEDSADDTFNIKDLRHEMKEVEEKFRKAMILNAQLDNDKAALHYQLELLKDRILELQEEYAQLQREHREKCSAHERLRREHASTERELGCARDAVRARDAAAAAAGFAFAEAAAGATHAEGFGAVPPLALLSHDQERALAESGDGTLDVRLQKLVSAKTALESEVRKLKLTLNEERAARQNGVSNQHDADYESELETLRKCVSEAKGRAARAEAEAALQAAGVARLEAQLQRLRARQDATDEREEQLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00055438;
- 90% Identity
- iTF_00044521; iTF_00055438; iTF_00825756;
- 80% Identity
- -