Acon004436.1
Basic Information
- Insect
- Acrobasis consociella
- Gene Symbol
- -
- Assembly
- GCA_963555685.1
- Location
- OY743107.1:5009561-5022888[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 28 3.7e-05 0.0032 18.8 1.7 1 23 206 228 206 228 0.99 2 28 0.0007 0.059 14.8 0.5 2 21 266 285 265 286 0.93 3 28 2.1e-05 0.0017 19.6 0.4 2 23 319 341 318 341 0.96 4 28 0.023 2 10.0 0.1 1 23 390 413 390 413 0.97 5 28 0.0059 0.5 11.9 0.2 1 23 431 453 431 453 0.96 6 28 0.00011 0.0096 17.3 3.8 1 23 490 513 490 513 0.95 7 28 0.00066 0.056 14.8 1.5 2 23 555 577 554 577 0.97 8 28 0.00085 0.072 14.5 0.5 1 23 627 650 627 650 0.97 9 28 8.8e-05 0.0075 17.6 0.1 1 23 707 729 707 729 0.97 10 28 0.012 1 10.9 3.8 2 23 741 762 740 762 0.96 11 28 0.28 23 6.6 1.5 2 23 774 795 773 795 0.95 12 28 0.0042 0.36 12.3 1.0 1 23 805 827 805 827 0.98 13 28 0.016 1.4 10.5 3.9 1 23 856 878 856 878 0.95 14 28 0.0044 0.37 12.3 4.2 1 23 889 911 889 911 0.97 15 28 2.3e-05 0.002 19.4 0.6 1 23 919 941 919 941 0.98 16 28 0.00056 0.048 15.1 0.6 2 23 961 983 960 983 0.97 17 28 0.38 32 6.2 0.4 1 23 1001 1023 1001 1023 0.93 18 28 0.13 11 7.7 3.7 1 23 1030 1052 1030 1052 0.97 19 28 0.0014 0.12 13.8 1.7 2 23 1063 1085 1062 1085 0.95 20 28 0.018 1.6 10.3 0.1 2 23 1108 1129 1107 1129 0.95 21 28 0.027 2.3 9.8 1.6 2 23 1210 1231 1209 1231 0.92 22 28 3 2.5e+02 3.4 4.7 5 23 1241 1259 1239 1259 0.94 23 28 0.0055 0.47 11.9 0.9 2 23 1270 1292 1269 1292 0.95 24 28 1.9 1.6e+02 4.0 3.7 2 23 1309 1327 1309 1327 0.93 25 28 0.33 28 6.4 3.0 2 21 1331 1350 1330 1351 0.94 26 28 0.58 50 5.6 0.9 2 23 1400 1421 1399 1421 0.93 27 28 0.0033 0.28 12.7 1.2 2 23 1432 1454 1431 1454 0.97 28 28 0.13 11 7.7 4.0 2 21 1492 1511 1491 1512 0.94
Sequence Information
- Coding Sequence
- ATGGCTCTCAAATTGGGAAAATGCAGGCTCTGCCTGAAGCTAGGGGACTTTTACTCGATATTCACGGTGGACAATACCCTGCAGCTGGCGGAGATGGTGATGGAATGCACGAGAGTCAAGgtatatgaaGGAGATGGGTTGCCGGACAAGGTGTGCTCGGAGTGCGTGCAGAAGCTCAGCAGCGCGTACATCTTCAAACAGCAGTGCGAGCGGGCGGACGAGGAGCTGCGGAGGAACTATGTTCCACCACCAGGTTTCAGCATCACTCCGCCACCTCCAAACAGACAAAGCAGCGACTCAGCGTTCTCGACTCACACGGACACATCCAACCAACTCTCCAAACCCTCGTCTTCCTCCGAAGTCCCCACTCCCAACAGAACTCGAAAGCGAAGTCGCAGCCGCAGTGTGGACGCCGCGTCCGTCGGCTCCCGGTCGCAAGAACGCCCTACTAACACCAAGCGCGTTCAAGAACTCAAAAACTCGCACAAAAAACGACCTAGAGTAGATTCTCCGAATACATCCTACGCGGATTCTGACTATGAGGCCTCGGAATTTGACGCTTCACAGTTCTCTATGGAAACAGACTCGGACGAACCATTGATCAGTGACGGGAATTACAAGTGCCCCAAGTGTGATAAGACCTTTACGAAGATCCGGAGTCGCGCATCACACATGAGAATTCACACGAGAGAGGCGCTTGGGAAGGACGCCGTTGTAGACATTCCTAAAGACGAAGAGGACCACATAGCGTCAGAGTCGTACGGAGAAGACGCAAACGACGCGGAGGACAAGCTCAGCTGCGAGAAATGCGAGAAAACCTTCAAGCTGAAGATTATGCTGAAACGACACATGGTTACATGTAGCGGGAAGCCACCTCCGCCGCAAATCTCGCCGCAGAAAGAGTTGCTCATATCTCTCGACCGCGTGGACCAGGTGCCCGGCGTCGGCAAGTTGAACTGCGACATCTGCACCGCGCAGTTCAAGAGTCTGGACAACCTGCGCAAGCACATGCGCGTCATACACGCCGCCGTGCCGCGGGCCGACACTGTGGTAGTCCCGAGGGAGCCGGTGTCCATCCCCTGCATGTTCTGCCGACAGGTCTTCGACGACTACTACCTCCACACGGAGCATTTCCATAAATGCCCACAAAAGAGCGCAGTCTCAAGTTACGAATGCCCCATGTGTAGTAAGGTTATAGGGCGAGTACAGAATTACTTGAGTCATTTGCGGAATATACACTTTGAGCCGAAAGCGGGGAGGAGCTCGCTGGACAACAATGCGGGTGGGGCGTTCCAGTGCCGCATGTGCAGCAAGAAGCTAGCCTCGCAGGACTTGCTCATCACGCACCTCGCCGCGCACATGTCCAACATCGACGGAGAAGACGCAGACGACGATTCCAGAGCCAGTCCTGTGGTGGATGACCACGCGAACGACAGCAGCTACACGGGCTACATGCCGCACGGGCCGCACAAGTGTCCCCACTGCGTCAAGTCCTTCTCGTACAAAAAGTCCCTCGAGTCACATATCGTGAAATGGCATCCCAACCTGCCGCTAGAGGTCAAAGTGGAAATCCCACCCGATAAAGCGCCGACGACTAGTTTGCTGACGGAGAAGTACCGAGCGAGCGAAGACGAGTCTAGTCAAGAAGAAGCCGAAGATCTTACGTGCGATATTTGCGAGAAAATGTTCTCGTACAAACGGGTTCTGCTGCAGCACAAGCGAACGAAACACAACATGAGTTCGGGGCATAAGCGCGCGAAAATCAGCCTTAAAGACTGCTCCGTGCGCTGCCTCATATGCGACGTGGAGATGAAAGTCAGTGCGGTCAACGAGCACAACCAAAAACACATAACGGCAAACCTAAAGCCGAGGAACCTATACACCTGTGCGCAGTGCGGGGAGAAGTTCAAGGCGTGTAGCGGACTAGCTAATCATATTAAACTGATCCATCGATTGAAGCAAGTGCCGAAGCCAAAGGTGCCCAAGTTGCAGGGCGGTTCGGACCTGGCGGATTTTTGTGAAGTCGTTGTGACGAAGACGGAGCCCCTGGACGACATCCAGAGTCACAACGGCTTGGAGGTTCCGTCGCAAGCGGCGCCGCTCGTCAACATGAGCGGGTTCACGTGCCCCATCTGCGGGAAGTCGCTGGGCACGCTCATCTCGCTGAAGAGGCACGTCAACTGGCACTCCAACGTGGGGAACAACATCGAGCAGAAGGTGGAGTGCTTCGTGTGCAAGGAGACGTTCCGTTTCAAGCGGCACTACCGGCTGCACATGAGCCAGCACTACAAGGACCCCAACATCGACCCCAAACACCTCACGTGCAGCATCTGCAACCGCAAGAGCAAGCACCTGCGCGCCGCGCTCGCGCACATGAACTTCCACAAGCAGACCCGCTTCCAGAACCAGGACTACCAGTGCTCCATCTGCAAGCGGGTCTTCCAGTACAGAAAAGTGTACCTATCTCACATGGCCATACACTATAAGCGGGGTGATAGCATCCAGAACACTGTTGTCGGCGACATACTGCCGGAAAATGCGGATAAAACCGTCTTCGACGGCTCTCATACTTGTCCTATGTGCGGCAAGGTGTGTGATTCCGAAAGCTCCCTCAAATGCCACATCAGCTGGCACAAATCCAAGACGATGCTGTTCGGAGCCCGCCACGAGTGCCACATCTGCCAAGTGCAGTTCACAAACAAGCGGAGACTCGAGTACCACATCCGAGAGCACTATGAAGACGAGAATGGTCCATTCAAGTGCAACATTTGTGGCAAAGGGTACATCGACGAGGAGTACTTCAAACGCCACCTCAAGGGCCACAACTTCGACAACCAGGTTCATAAGAAGCGGATAGAGAAGTTGCGGAAAGACAAAGTTAAGTGTCCGATCTGTACGCGGTACTACCCTGACTTGATCCACCTCATCCGGCACATCAAGCGAACGCACCCCGAGAGCAAAATGATCAAGACAGACCCCGACGCGCCGCCGCCCATGTACTACTCCTGCAAGCTGTGCGCTAAAGTGTTCCTCGACCAGCGTCGCCTGCAGAGTCACGAGGAGGCGCATCTCAGGAAGCCAGAGTTCTTCAAGTGCAAGTTCTGCGGCAAGaaaaccatatcgctaaagaACCACCGGGTGCACATCAAGGGCCATCTCACGACTAAGTTCCTGGACAATCCGCTGAAGTGCACGCAGTGCGACGAGGTGTTCATCCGCGGGTACGACCTGCACCACCACCTGCGGGACGTGCACGGCATCGAGGAGACGTGGATCGCCGACCGCAACGAGCAGGCGCTGACGGGCCCGCTCAAGGAGCTCCAGTGCTCCGTGTGCCTCAAGATCCTCGCCAGCAAGGGCAACTACGAGCGCCACATTGACTACCACAACTCGCTGCGCTGCAACTACTGCTTCGACTACTTCAGCTCGCTCAGGTTCCTGGAGGGCCACTTAGCGTTCAGCTGCGACAAGAAAAGGCTCATCGGCGACACGGAAGTCTACCCGCGGAAAATCAAATGCCACGTGTGCTACAAGGCTTTCCATTTGCAAGTGAAGTTGGACTGCCATTTGCGGACGCAGCACGGTATTAAAGTGAACAAGGAAGCCTCCACCGACAGGAAGGATATCGTTTGCGATTACTGTTTCAAAGTGTTTGAAAACGAGTATTGTTTGAGTACTCATAAGGTCTACCATCGCACTATCGGGTACTTCGGGTGTATCTACTGCAACCGCAAGTTTAACACGATGACTGCGTACCGCAAACATAAGAATCATCATTTTTCGCAACTGAACGTAGATAACCCGACAAAGTGTGAACATTGTGACGAGACGTTTGTTCCTTTCCGGGAGATGATCACCCACATGAAGGAGGAGCACGGCGATGACAAAGAATGGGTTGTCTTGCCCAAAGAGTCCATTGAAGAAGAGTGCACAATCTGCAAGAAAATATTCTTCAACCTGCATAGGCACATGGACTACCATGAAGAAAACAAGTGCAAGAAATGCGGCGAGTACTTCTTTTCGAGGACAGACTTCGACAACCACCTGTGTAGCATTGAGAGCGACGATGAAACAGCGGAGAGAGTGGACGGCAGCTTGGAGTCCAAATACCAAGAGTGCAGCTTCTGTTTCAAGCCAATAACCAGGATCAGCTCGGAGCTGAAGCACTTGAAGATCCACAGAGGCTCGGGCTCGATATCCTGTCGCTTCTGCTCACTCAAGTTCAAGACGATGGACGCGTTCAACATCCACGCGTTCTCGCACCGAAGTCGCAAATACAACAAGAAGCCGATAAAGTGTAGGAAATGCAACGAGCGCTTCGTGAAGTACGGACCGTTTATGAAGCACATGAAGACAGTGCACAAGTCGAACAAAAAGCTTCACTACCGAGCCATTGTGAAGGCGGAGCCCTGTGTGGTTTGTGGTGACGAGTTCCCCAACCTGCACAACCACTACCGTGCGCATCTGCAGAACCAGTGCCTCAACTGCAAGAAGTACTTTACATCCTCGAAACTGTTCTCGCGACACCAGTGCGACGTCGAGGACGCTGATCCTTCTAAAGTGTTCACGTGCGACGAAAATCTCCTAGCTCTTATAAACTCATACGTTCCTAAAGATGAGAAGGATGACGAGAAGTACTACGGCCACGATGATGGGGAAGAAAGTGAGCAGGAGGAGATAGAGACGAACGGAGAGGAAAGGGAGTTTATAAATGAAAGTGACATAAAGACGGTTATTGAGAGTGAGGACAGTCAGGAGGCTCAAGTAGCCGAACCGGACCCTGACGAGAGGGAACTGCACCTCATGGCGCAGTCTCCCATCATATCCGATGTGCTCTCTTTGTATCAGAGCCAACAAGCTGTTAAGGATGACGACATCGTCAATCTGACTGACGACGACTCTATGGACATTGATGTCAGTATTCCCGTTATAACTATCGATTGA
- Protein Sequence
- MALKLGKCRLCLKLGDFYSIFTVDNTLQLAEMVMECTRVKVYEGDGLPDKVCSECVQKLSSAYIFKQQCERADEELRRNYVPPPGFSITPPPPNRQSSDSAFSTHTDTSNQLSKPSSSSEVPTPNRTRKRSRSRSVDAASVGSRSQERPTNTKRVQELKNSHKKRPRVDSPNTSYADSDYEASEFDASQFSMETDSDEPLISDGNYKCPKCDKTFTKIRSRASHMRIHTREALGKDAVVDIPKDEEDHIASESYGEDANDAEDKLSCEKCEKTFKLKIMLKRHMVTCSGKPPPPQISPQKELLISLDRVDQVPGVGKLNCDICTAQFKSLDNLRKHMRVIHAAVPRADTVVVPREPVSIPCMFCRQVFDDYYLHTEHFHKCPQKSAVSSYECPMCSKVIGRVQNYLSHLRNIHFEPKAGRSSLDNNAGGAFQCRMCSKKLASQDLLITHLAAHMSNIDGEDADDDSRASPVVDDHANDSSYTGYMPHGPHKCPHCVKSFSYKKSLESHIVKWHPNLPLEVKVEIPPDKAPTTSLLTEKYRASEDESSQEEAEDLTCDICEKMFSYKRVLLQHKRTKHNMSSGHKRAKISLKDCSVRCLICDVEMKVSAVNEHNQKHITANLKPRNLYTCAQCGEKFKACSGLANHIKLIHRLKQVPKPKVPKLQGGSDLADFCEVVVTKTEPLDDIQSHNGLEVPSQAAPLVNMSGFTCPICGKSLGTLISLKRHVNWHSNVGNNIEQKVECFVCKETFRFKRHYRLHMSQHYKDPNIDPKHLTCSICNRKSKHLRAALAHMNFHKQTRFQNQDYQCSICKRVFQYRKVYLSHMAIHYKRGDSIQNTVVGDILPENADKTVFDGSHTCPMCGKVCDSESSLKCHISWHKSKTMLFGARHECHICQVQFTNKRRLEYHIREHYEDENGPFKCNICGKGYIDEEYFKRHLKGHNFDNQVHKKRIEKLRKDKVKCPICTRYYPDLIHLIRHIKRTHPESKMIKTDPDAPPPMYYSCKLCAKVFLDQRRLQSHEEAHLRKPEFFKCKFCGKKTISLKNHRVHIKGHLTTKFLDNPLKCTQCDEVFIRGYDLHHHLRDVHGIEETWIADRNEQALTGPLKELQCSVCLKILASKGNYERHIDYHNSLRCNYCFDYFSSLRFLEGHLAFSCDKKRLIGDTEVYPRKIKCHVCYKAFHLQVKLDCHLRTQHGIKVNKEASTDRKDIVCDYCFKVFENEYCLSTHKVYHRTIGYFGCIYCNRKFNTMTAYRKHKNHHFSQLNVDNPTKCEHCDETFVPFREMITHMKEEHGDDKEWVVLPKESIEEECTICKKIFFNLHRHMDYHEENKCKKCGEYFFSRTDFDNHLCSIESDDETAERVDGSLESKYQECSFCFKPITRISSELKHLKIHRGSGSISCRFCSLKFKTMDAFNIHAFSHRSRKYNKKPIKCRKCNERFVKYGPFMKHMKTVHKSNKKLHYRAIVKAEPCVVCGDEFPNLHNHYRAHLQNQCLNCKKYFTSSKLFSRHQCDVEDADPSKVFTCDENLLALINSYVPKDEKDDEKYYGHDDGEESEQEEIETNGEEREFINESDIKTVIESEDSQEAQVAEPDPDERELHLMAQSPIISDVLSLYQSQQAVKDDDIVNLTDDDSMDIDVSIPVITID
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01220836; iTF_00013323; iTF_00651980; iTF_01302605; iTF_00720594; iTF_00073046; iTF_00640700;
- 90% Identity
- iTF_00013323;
- 80% Identity
- -