Esim030042.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Elegia similella
Gene Symbol
-
Assembly
GCA_947532085.1
Location
OX383927.1:6183632-6195546[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 28 1.4e-05 0.001 20.2 1.9 1 23 206 228 206 228 0.99
2 28 0.00013 0.01 17.1 0.5 2 22 264 284 263 284 0.93
3 28 1.5e-05 0.0011 20.1 0.4 2 23 316 338 315 338 0.96
4 28 0.037 2.8 9.4 0.3 1 23 387 410 387 410 0.96
5 28 0.006 0.46 11.9 0.2 1 23 427 449 427 449 0.96
6 28 5.1e-05 0.0039 18.4 4.0 1 23 487 510 487 510 0.97
7 28 0.00067 0.051 14.9 3.7 2 23 552 574 551 574 0.96
8 28 0.00086 0.066 14.5 0.5 1 23 624 647 624 647 0.97
9 28 0.00079 0.061 14.6 0.2 1 23 704 726 704 726 0.97
10 28 0.022 1.7 10.1 4.7 2 23 738 759 737 759 0.96
11 28 0.28 21 6.6 1.5 2 23 771 792 770 792 0.95
12 28 0.0043 0.33 12.3 1.0 1 23 802 824 802 824 0.98
13 28 2.6 2e+02 3.6 6.8 1 23 853 875 853 875 0.91
14 28 0.026 2 9.9 4.2 1 23 886 908 886 908 0.97
15 28 4.2e-05 0.0032 18.6 0.5 1 23 916 938 916 938 0.98
16 28 0.00028 0.021 16.1 0.7 2 23 958 980 957 980 0.97
17 28 0.15 12 7.5 0.5 1 23 998 1020 998 1020 0.94
18 28 0.15 12 7.5 3.7 1 23 1027 1049 1027 1049 0.97
19 28 0.11 8.1 7.9 2.1 2 23 1060 1082 1059 1082 0.95
20 28 0.01 0.8 11.1 0.2 2 23 1105 1126 1104 1126 0.95
21 28 0.0061 0.46 11.9 1.0 2 23 1207 1228 1206 1228 0.95
22 28 4.7 3.6e+02 2.8 5.2 5 23 1238 1256 1236 1256 0.94
23 28 0.016 1.2 10.6 0.8 2 23 1267 1289 1266 1289 0.94
24 28 0.4 31 6.1 2.3 2 23 1306 1324 1306 1324 0.89
25 28 0.073 5.6 8.5 2.4 2 21 1328 1347 1327 1348 0.94
26 28 0.6 45 5.6 0.9 2 23 1397 1418 1396 1418 0.93
27 28 0.012 0.93 10.9 2.0 2 23 1429 1451 1428 1451 0.97
28 28 0.15 11 7.5 3.9 2 20 1489 1507 1488 1509 0.94

Sequence Information

Coding Sequence
ATGGCTCTCAAACTGGGGAAATGCAGGCTGTGCCTGAAGCTGGGGGATTTTTACTCGATATTTACGGTGGACAACTCCCTGCAGCTAGCGGAGATGGTAATGGATTGCACAAGGGTCAAGGTGTACGAAGGAGATGGGTTACCGGACAAGATCTGCACAGAGTGCGTACAGAAACTCAGCAGCGCTTATATCTTCAAGCAGCAGTGCGAGAGGGCTGATGAAGAGCTGAGACGGAACTATGTCCCGCCACCAGGGTTCAGCATCACGCCGCCGCCTCCAAACAGACAAAGCAGTGACTCGGCCTTCTCGACGCACACGGACACCTCCAACCAGCTCTCCAAACCGTCCTCTTCCAGTGACATCCCCACTCCTAACAGGACTCGCAAGCGAAGCCGCAGCCGCAGTGTGGACGCTGCCTCCGTCGGCTCCCGCTCACAGGAACGCCCTACCAACACCAAGCGCGTTCAAGAACTTAAGAACTCCCACAAAAAACGACCTAGGGTCGAATCCCCTAACACATCCTTCGCTGATTCTGACTATGAAGCTTCAGAATTTGACGCTTCGCAGTTTTCAATGGAGACAGACTCGGATGAACCTTTGCTCAAAGATGGCAATTACAAATGTCCGAAATGTGACAAGACCTTCACGAAACTGCGGAGCCGCGCCTCGCACATGAGAGTTCACACGAGAGAGGCGCTCGGGAAGGACGCCCTAGTGGACATCCCTAGGGAGGAAGAGAACCACATCGACTCATATGGGGAAGACGCGAACGACGCTGAAGACAAGCTTAGCTGCGAAAAGTGCGACAAAACCTTCAAGCTAAAAATCATGTTAAAACGACACATGGCCACTTGCAGCGGGAAGCCAACTCCGCTAACTTCTCCCAAAAAAGAATTGCTGATATCCCTTCAGCCGATTGACCAAGTACCTAACGTGGGGAAACTCAACTGCGAGATCTGTACCGCTCAGTTCAAAACGCTGGATAACCTCCGCAAGCATATGCGGGTGATACATGCAGCTGTACCCAGGGTCGACACCGTCATCCTACCAAAAGAACCTGTGTCCATCCCTTGTTTATTCTGCCGAGAGACCTTCGACAATTACCTCGTCCATACAGAGCATTTCCACAAGTGTCCCCAGAAGGCGGCTGTCGCAAGTTACGAATGCCCCATGTGCAGTAAGACTATAGGCAGGGTGCAGAACTACTTGAGTCACCTGCGGTTTGTGCACTTTGAGCCGAAAGCGAGCCGGAACTCGTTGGAGACGAGCTCCGGGGAGTTCCAATGCCGCATGTGCAGCAAGAAGCTCGCGTCGCAGGACTTGCTGATCACGCACCTCGCGGCGCACATGTCCAACATCGACGGAGACGATACAGCCGACACAGATTCCAGGGCTAGTCCCGTGATAGACGACCATGTCGCGGACACCAGCTACACAGGCTACATGCCGCACGGGCCGCACAAATGTCCTCACTGCGTCAAATCCTTCTCGTACAAGAAATCCCTCGAGACGCACATCATCAAATGGCACGCCAACATGCCGATAGAAGTCAAAGTTGAGGGCCCGTCCGAAAAGAACGCTTCCACCGGTTTGCTCACAGAAAAATACCAAGCAAGCGACTCAGAATCTAGTCAAGAAGAAGCCGAAGACCTTACGTGTGATATTTGCGAGAAAATGTTCTCGTACAAGCGTCTCTTACTGCACCACAAGAAAACAAAACACAACATGAGTTCTGGACACAAGCGCGCGAAAATCAACCTTAAAGACTGTATGGTACGCTGCCTCATATGCGACCTGGAGATGAAAGTTAGCGTTGTCAACGAGCACAACCAGACACACATAACGGCTAATATAAAGCCGCGTAATATGTACACGTGCGCGCAGTGTGGGGAGAAGTTCAAGGCGTGTAGTGGTCTAGCTAATCACATCAAGCTGATCCATCGGCTGAAGCAGGTGCCCAAGCCGAAGGTGCCGAAGTTGCAGGGCGGGTCGGAGCTGGCGGATTTTTGTGAAGTCGTTGTGACGAAGACGGAGCCCCTGGACGACATCCAGAGTCACAACGGCTTAGAGGTTCCGTCGCAAGCGGCGCCGCTCGTTAGTCTGAGTGGGTTCACGTGCCCCATCTGCAGCAAGACCCTGGGTACGCTGATCTCACTCAAGAGACACGTCAATTGGCATAACAACGTTGGCAACAATATTGAGCAGAAGACTGAGTGCTTCGTCTGTAAGGAGACGTTCCGCTTCAAGCGGCACTACCGGCTGCACATGAGCCAGCACTACAAGGACCCCAACATCGACCCCAAGCACCTGACTTGCAGCATCTGTAACCGCAAGAGCAAGCATCTGCGCGCCGCGCTGGCGCACATGAACTTCCACAAGCAGACCCGCTTCCAGAACCAGGACTACCAGTGCTCCATCTGCAAGCGCGTCTTCCAGTACCGCAAGGTCTACTTGTCGCACATGGCCATACACTATAAGCGAGGTGAGAGCATTCAGAATACTGTAGTCGGCGACATACTGCCTGAAAACGCTGATAAAGCCGCTTTCGATGGCTCGCATACGTGTCACCTCTGCGGTAAGGTATGTGATTCTGAAAACTCCCTCAAATGTCACGTTAGTTGGCACAAATCGAAGACTTCGTTATTCGGCAACAGGCACGAGTGCCACATCTGCCAAGTGCAGTTCACCAATAAGAGGAGATTGGATTACCACATCCGGGAGCATTACGAGGACGACAACGGCCCGTACAAATGCACTATCTGCGGCAAAGGGTATATAGATGAGGAGTACTTCAAGCGACACGTCAAGGGCCATAACTTCGACAATCAAAGTCACAAGAAGCGAATAGAGAAATTGCGGAAAGACAAGGTAAAGTGCCCGATTTGTACGCGATTCTACCCTGACCTTATACATCTCATCCGGCACATCAAGCGCACGCATCCGGAGAGTAAGATGATCAAGACGGACCCCGACGCTCCGCCACCCATGTACTACTCGTGCAAGCTGTGCGCCAAGGTGTTCCTCGACCAGCGCCGGCTGCAGAAACACGAGGAAGCCCACTTGAGGAAGCCGGAGTTCTTCAAGTGCAAATTCTGCGGCAAGAAAACTATATCGCTAAAGAACCACAGGATACACATCAAAGGTCATCTCACGACGAAGTTCCTCGACAATCCGCTGAAGTGTACGCAGTGTGACGAGCTGTTCATCAAAGGCTACGACCTGCACCACCACCTGCGAGACGTGCACGACATCGAGGAGACGTGGATCGCCGAGCGCAACGAGCAGGCGCTGACGGGCCCGCTCAAGGACCTGCAGTGCTCCGTGTGCCTCAAGGTGCTGGCCAGCAAGGGCAACTACGAGCGCCACCTCGACTACCACAACTCCCTGCGCTGCAACTACTGCTTCGACTACTTCAGCTCGCTCCGCTTCCTAGAGGGGCATCTCGCGTTCAGCTGTGATAAGAAAAAGCTCATCGGTGACACAGAAGTCCATCCGAGGAAGATTAAGTGCCACGTTTGCTACAAAGCTTTCCATTTGCAAGTGAAGTTGGACTGCCATTTACGAACACAGCACAATATCAAAGTAAACAAAGAAGCTTCTGCCGACAGGAAAGATATAGTTTGCGACTACTGTTTCAAAGTATTCGAAAACGAGTATTGCTTGGCTAATCATAAGATTTACCATCGCACTATCGGATATTTTGGATGCATTTACTGCAACAGGAAGTTTAACACGATGACTTTGTACCGTAAACATAAGAATCATCATTTTTCACAACTGAATGTGGATAACCCGACCAAGTGTGAGCATTGCGACGAGACGTTCGTTCCTTTCCGCGACATGATATACCACATGAAGGACGTGCACGGCGACGATAAGGAATGGGTGGTGTTGCCCAAGGAGTCCATCGAAGAAGAGTGCCCTATCTGCAAGAAAGTGTTCTTCAATTTGCACAGGCATTTAGATTACCATGAGGAGAATAAGTGCAAGAAGTGTGGAGAGTACTTCTTCTCGAGAACAGACCTCGACAACCACTTGTGTAGCATCGAGAGCGACGACGAGACCGCAGAGAGAGTCGACGGCAGCTTGGAGTCCCAGTACCGCGAGTGCAACTTCTGCTTCAAGCCCATCACCAGGGTGAGCTCGGAGCTGAAGCACGTTAAGATACACAGAGGATCCGGCTCGATATCTTGCCGGTTTTGTTCACTTAAGTTCAAGACAATGGACGCATTTAACATCCACGCGTTCTCGCACCGAAGCCGCAAATATAACAAGAAGCCAATAAAGTGTCGGATGTGCAACGAGCACTTCGTGAAGTATGGTCCCTTCATGAAGCACATGAAGACGGTGCACAAGTCGAATCAGAAGCTGCACTACCGCGCCATCGTGAAGGCCGAGCCCTGCGTGGTCTGCGGCGACGAATTCCCCAACCTGCACAACCACTACCGAGCCCATCTGCAGAACCAGTGCCAGAATTGCAAGAAGTACTTCACGTCCTCCAAACTGTTCTCTCGGCACGAGTGTGATGTACCAGACGCCGATCCTTCTAAAGTCTTCACCTGTGAAGAGAATCTCCTAGTCCTTATAAACACATATGTTCCAAAAGATGAAAAAGACGACGAGAAATACTACGGCCATGAGGACGACGGCGATGATGATCAAGAAGTGGAAGCGACAGAACAGACCGAGTTTATTAACGAGAGTGATATAAAGACTAACATTGAAAGTCAGGACGAGGAGAGTCAGGAGGCGCCGGTACCGGAACCGGACCCGGACGAGCGCAGTCTGCATCTCATGGCGCAGTCCCCGATCATCTCCGACGTGCTGTCGCTGTATCAGAGCCAGAACGACGCGAAGGATGACGATGTCATTCATCTAACTGATGACGAGTCTATGGACATGGACGTTAGTATCCCTGTTATAACTATTGATTAA
Protein Sequence
MALKLGKCRLCLKLGDFYSIFTVDNSLQLAEMVMDCTRVKVYEGDGLPDKICTECVQKLSSAYIFKQQCERADEELRRNYVPPPGFSITPPPPNRQSSDSAFSTHTDTSNQLSKPSSSSDIPTPNRTRKRSRSRSVDAASVGSRSQERPTNTKRVQELKNSHKKRPRVESPNTSFADSDYEASEFDASQFSMETDSDEPLLKDGNYKCPKCDKTFTKLRSRASHMRVHTREALGKDALVDIPREEENHIDSYGEDANDAEDKLSCEKCDKTFKLKIMLKRHMATCSGKPTPLTSPKKELLISLQPIDQVPNVGKLNCEICTAQFKTLDNLRKHMRVIHAAVPRVDTVILPKEPVSIPCLFCRETFDNYLVHTEHFHKCPQKAAVASYECPMCSKTIGRVQNYLSHLRFVHFEPKASRNSLETSSGEFQCRMCSKKLASQDLLITHLAAHMSNIDGDDTADTDSRASPVIDDHVADTSYTGYMPHGPHKCPHCVKSFSYKKSLETHIIKWHANMPIEVKVEGPSEKNASTGLLTEKYQASDSESSQEEAEDLTCDICEKMFSYKRLLLHHKKTKHNMSSGHKRAKINLKDCMVRCLICDLEMKVSVVNEHNQTHITANIKPRNMYTCAQCGEKFKACSGLANHIKLIHRLKQVPKPKVPKLQGGSELADFCEVVVTKTEPLDDIQSHNGLEVPSQAAPLVSLSGFTCPICSKTLGTLISLKRHVNWHNNVGNNIEQKTECFVCKETFRFKRHYRLHMSQHYKDPNIDPKHLTCSICNRKSKHLRAALAHMNFHKQTRFQNQDYQCSICKRVFQYRKVYLSHMAIHYKRGESIQNTVVGDILPENADKAAFDGSHTCHLCGKVCDSENSLKCHVSWHKSKTSLFGNRHECHICQVQFTNKRRLDYHIREHYEDDNGPYKCTICGKGYIDEEYFKRHVKGHNFDNQSHKKRIEKLRKDKVKCPICTRFYPDLIHLIRHIKRTHPESKMIKTDPDAPPPMYYSCKLCAKVFLDQRRLQKHEEAHLRKPEFFKCKFCGKKTISLKNHRIHIKGHLTTKFLDNPLKCTQCDELFIKGYDLHHHLRDVHDIEETWIAERNEQALTGPLKDLQCSVCLKVLASKGNYERHLDYHNSLRCNYCFDYFSSLRFLEGHLAFSCDKKKLIGDTEVHPRKIKCHVCYKAFHLQVKLDCHLRTQHNIKVNKEASADRKDIVCDYCFKVFENEYCLANHKIYHRTIGYFGCIYCNRKFNTMTLYRKHKNHHFSQLNVDNPTKCEHCDETFVPFRDMIYHMKDVHGDDKEWVVLPKESIEEECPICKKVFFNLHRHLDYHEENKCKKCGEYFFSRTDLDNHLCSIESDDETAERVDGSLESQYRECNFCFKPITRVSSELKHVKIHRGSGSISCRFCSLKFKTMDAFNIHAFSHRSRKYNKKPIKCRMCNEHFVKYGPFMKHMKTVHKSNQKLHYRAIVKAEPCVVCGDEFPNLHNHYRAHLQNQCQNCKKYFTSSKLFSRHECDVPDADPSKVFTCEENLLVLINTYVPKDEKDDEKYYGHEDDGDDDQEVEATEQTEFINESDIKTNIESQDEESQEAPVPEPDPDERSLHLMAQSPIISDVLSLYQSQNDAKDDDVIHLTDDESMDMDVSIPVITID

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00012238;
90% Identity
iTF_01302605;
80% Identity
-