Eelu021872.1
Basic Information
- Insect
- Ephestia elutella
- Gene Symbol
- -
- Assembly
- GCA_018467065.1
- Location
- CM031578.1:4655711-4665863[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 29 5.5e-05 0.0067 18.3 2.1 1 23 204 226 204 226 0.99 2 29 0.00014 0.018 17.0 0.9 2 22 257 277 256 277 0.94 3 29 2.9e-05 0.0036 19.2 0.2 2 23 309 331 308 331 0.96 4 29 0.033 4.1 9.6 1.1 1 21 380 400 380 403 0.95 5 29 0.64 79 5.5 0.0 1 23 420 442 420 442 0.96 6 29 4.5e-05 0.0056 18.6 0.4 2 23 477 499 476 499 0.96 7 29 0.00011 0.013 17.4 1.8 2 23 543 565 542 565 0.97 8 29 0.00088 0.11 14.5 0.5 1 23 615 638 615 638 0.97 9 29 3.2e-05 0.004 19.1 0.1 1 23 695 717 695 717 0.97 10 29 0.0044 0.54 12.3 3.7 2 23 729 750 728 750 0.97 11 29 0.29 35 6.6 1.5 2 23 762 783 761 783 0.95 12 29 0.0044 0.54 12.3 1.0 1 23 793 815 793 815 0.98 13 29 2.4 2.9e+02 3.7 6.9 1 23 844 866 844 866 0.91 14 29 0.0046 0.56 12.3 4.2 1 23 877 899 877 899 0.97 15 29 6.3e-05 0.0077 18.1 0.4 1 23 907 929 907 929 0.98 16 29 0.00067 0.082 14.9 0.8 2 23 949 971 948 971 0.97 17 29 0.02 2.4 10.3 0.4 1 23 989 1011 989 1011 0.94 18 29 0.43 53 6.1 3.6 1 23 1018 1040 1018 1040 0.96 19 29 0.44 54 6.0 2.3 2 23 1051 1073 1050 1073 0.95 20 29 0.031 3.8 9.7 0.2 2 23 1096 1117 1095 1117 0.95 21 29 0.015 1.8 10.7 1.8 2 23 1198 1219 1197 1219 0.94 22 29 4.8 5.9e+02 2.8 5.2 5 23 1229 1247 1227 1247 0.94 23 29 0.014 1.7 10.8 0.8 2 23 1258 1280 1257 1280 0.95 24 29 1.2 1.5e+02 4.7 2.3 2 23 1297 1315 1297 1315 0.88 25 29 0.41 50 6.2 2.7 2 21 1319 1338 1318 1339 0.93 26 29 0.41 50 6.2 1.8 2 23 1388 1409 1387 1409 0.94 27 29 0.027 3.3 9.9 2.4 2 23 1420 1442 1419 1442 0.96 28 29 7.4 9e+02 2.2 0.4 3 23 1459 1476 1458 1476 0.76 29 29 0.06 7.3 8.8 4.4 2 21 1480 1499 1479 1500 0.95
Sequence Information
- Coding Sequence
- ATGGCTCTCAAATTGGGAAAATGCAGGCTCTGCCTGAAGCTGGGCGACTTTTACTCAATCTTCACCGTGGACAATGCCCTACAGTTAGCGGAAATGGTGATGGAATGCACGAGAGTCAAGGTGTATGAAGGTGATGGGTTGCCAGACAAAATCTGCACTGAGTGTGTGCAGAAGCTAAGTAGTGCTTACATATTCAAGCAGCAGTGCGAGAGAGCTGATCAAGAACTTAGGAGGAACTATGTCCCACCACCAGGTTTCAGCATCACCCCACCACCACCAAACAGGCAGAGCAGTGACTCTGCTTTCTCGACGCACACGGACACTTCCAACCAGCTGTCCAAGCCTTCATCCTCTGCGGATCAGACCCCCATCAACAATCGCAAGCGTAGCCGCAGTCGCAGCGCCGACGCCGCGTCCGTTGGCTCGCGAACACAAGACCTTCCCGCCAAACGGGTTCAAGAACTCAAAAATTCGCACAAAAAACGACCTAGAGTTGACTCCCCTAACACATCCTACGCTGATTCCGACTATGAGTACGACAATAGCGCCTCGCAATTTTCAATGGAAACCGACGACTCAGATGAACCGCTATTGAAAGGAGACGGCCCATATAAATGCTCGAAATGTGACAAGGTTTTCACGAAACTGCGCAGCCGCGCGTCTCACATGCGCATCCATACTCGGGAAGCGCTAGGACAAGACGCGGTAGTAGACATACCTAGAGATGAAGACTATTTGGAGGACGCAGTCGACGACGAGGACAAGTTGAGCTGCGAGAAGTGCGACAAGACATTCAAGCTGAAAATCATGCTGAAGAGACACATGTCCACATGCACCGGGAAGCCAGCTCCACCAACAGTTTCCCCACAAAAAGAGCTGTTGATATCCCTCCAGCCGATCGACCAAGTGCCAGTTGGGAAACTCGTCTGCGACATCTGTACAGCAAGGTTTAAAACCTTGGACGGTTTGAGGAAGCATATGCGGGTGATCCACGCCGCGGTACCGAAGCTCGATACGATAGTGGTGCCGCGTGCTCCCGTGGCGATCCCTTGCATGTTCTGTCGGAAGGTGTTCGACGACTACTTCGTCCACACGGAGCACTTCCACAAGTGTCCGGAGAAGAGGCCCGTGTCGGGTTACGAGTGTCCGATGTGTGAGAAGTCGATATCTCGGATCCAGAACTACCTGAGCCACTTGCGGTGCATCCACTTCGATCTGAAGCCGCCTAGTGCTAGGGCTTCGCTGGAGGCCACAGAGTTCCAGTGCCGCGTGTGCGCGCAGCGGCTGGGATCGCAGGACGCGCTCGTGACGCACCTCGCTGCACACATGTCCAATATGGACGACCAGGGGGATGACTCCAGGGCCAGCACAGCAGATGGCGGGGTCTCGGACACCAGCTACCACAGCTACATGCCTCACGGGCCCAACAAGTGCCCCTATTGCGTCAAATCCTTCTCATACAAAAAGGGCCTAGAAAACCACATCGCCAAAGTCCATTCCAATGCAGAACTGCCTTTAGAAGTCAAAGTGGAAGTCCCGCCTGATAAGAATCCTTCAACGAGTCTGTTAACTGAGAAATATGCAGAAACTGAGTCAGAATCTAGTCAAGACGAAGCCGAGGACCTGACCTGCGACATTTGTGAAAAGATGTTCTCGTACAAGCGTCTCCTACTGCAGCACAAACGCACCAAACACAACATGAGTTCGGGCCACAAGCGGGCGAAGATAAATCTCAAAGACTGTTCTGTGCGTTGCCTCATTTGCGACGTTGAGATGAAAGTCAGCgctgttaatgagcacaatcagAAGCATATAACGGCTAATATTAAACCGAGGAACTTGTACACGTGTGCGCAGTGTGGAGAGAAGTTTAAGGCGTGCAGCGGTCTAGCGAACCACATCAAGTTGATCCACCGACTGAAGCAGGTGCCAAAGCCAAAGGTGCCCAAGTTGCAAGGCGGGTCGGAGCTGGCGGATTTTTGCGAGGTCGTTGTGACGAAGACGGAGCCCCTGGACGACATCCAGAGTCACAACGGCTTGGAgGTTCCGTCGAGCGCGGCCCCGCTGATCAACCTGAGCGGGTTCACGTGCCCCATCTGCGGCAAGACGCTGGCCACGCTCATCTCGCTCAAGCGGCACGTCAACTGGCACTCCAACGTCGGCAACAATATCGAGAGTAAGGTGGAGTGCTTCGTCTGTAAAGAGACGTTCCGGTTCAAACGCCACTACAAGTTGCACATGAGTATGCATTACAAGGACCCGAACATCGATCCGAAGCACCTGACCTGTTCCATTTGCAACCGCAAGAGTAAGCATCTCCGCGCCGCCCTCGCGCACATGAACTTCCACAAGCAAACCCGCTTCCAGAACAAAGACTACCAGTGCTCCATCTGCAAGCGAGTCTTCCAATATAGAAAAGTCTACCTCTCCCATATGGCCATTCACTACAAACGAGGTGAGAGCATCCAAAACACTGTAGTCGGTGACATATTACCTGAAAACGCAGATAAATCCGCCTTCGATGGAAGCCACACATGCCATCTGTGCGGAAAGGTCTGCGATTCAGAAACCTCACTCAAATGCCACGTCAGCTGGCATAAATCCAAAACTTCGCTCTTCGGCAATAGACATGAGTGCCACATCTGCCAAGTCCAGTTCACTAATAAGAGAAGATTAGAATATCATATTAGAGAACATTATGAGGATGAGAATGGTCCGTACAAATGTACTATTTGCGGAAAAGGCTATATTGATGAGGAGTATTACAAACGACATGTCAAAGGGCACAACTTTGATCATCAATGTCACAAGAAGCGGATAGAGAAATTGAGGAAAGATAAGGTAAAGTGTCCCATTTGTACGAGGTTCTACCCGGATCTGCTGCATTTGATTAGACATATTAAGCGGACGCATCCAGAAAGTAAGATGATCAAAAATGACCCGGACGCGCCTCCGCCCATGTATTACTCGTGCAAGCTGTGCGCCAAGGTGTTCATGGACCAGCGTCGGCTGCAGAGCCACGAGGAAGCCCATCTGAGGAAACCTGAATTCTTCAAATGCAAATTCTGCGGGAAGAAAACTATATCGCTCAAAAGCCACAGGATACACATAAAGGGACATTTGACAACGAAGTTCTTGGACAATCCGCTCAAATGCACGCAATGCGACGACATGTTTATCAAGGGCTACGACTTGCACCACCATCTCCGCGACGTCCACAATATCGAGGAGACGTGGATCGCGGACCGCAACGAGCAGGCTCTGACCGGCCCGCTCAAGGACCTGCAGTGTTCCGTGTGTCTCAAGATCCTCGCCAGCAAAGGGAATTACGAACGCCATCTCGATTACCATAACTCTCTTCGATGCAACTATTGCTTCGACTATTTCAGCTCGCTGAGGTTCTTAGAGGGACATTTGGCGTTCAGTTGCGATAAGAAAAAACTGATAGGCGACACCGAGCCGCATCCTAGGAAGATCAAATGCCACGTTTGCTACAAAGCTTTCCACTTGCAAGTCAAGTTGGATTGCCACTTGCGAACGCAGCACGGCATCAAGGTTAACAAAGAGGCCTCTTCCGAAAGAAAGGATACCGTTTGCGATTATTGCTTCAAAGTGTTCGAAAACGAAGACTGCTTGATTTCCCACAAGACCTACCATCGCACCTTCGGATATTTCGGCTGCATCTACTGTAATAGGAAATTCAACACGATGACTTTGTATCGGAAGCATAAGAATCACCATTTCTCTCAGCTGAATGTCGACAATCCTACCAAGTGCGAACATTGTGATGAGACATTTGTGGCTTTCCGCGAGATGATCAGCCACATGAAGGAGGTACACGGCGACGACAAGGAGTGGGTCACCATGCCCAAGGAAGTTATCGAAGAGGAATGTCCTATCTGTAAGAAAATCTTCTTCAATTTGCACAGGCACTTGGATTATCACGAGGAAAATAAGTGCAAGAAGTGCGGAGAATACTTCTTCTCGCGGACAGACTATGATAACCACTTGTGTAGTATCGAGAGCGATGACGAGACAGCTGAGAGGTGCGACGGCAGTCTGGAGTCTAAGTACCAGGAGTGCGGCTTCTGCTTCAAGCCGATCACGAGGGTGTCTTCGGAGCTGAAGCACGTGAAAATCCACCGCGGCTCAGGCTCTATTTCATGCCGCTTCTGCCCGCACAAGTTCAAAACCATGGACGCTTTCAACATCCACGCGTTCTCACACAGAAGTAGGAAATACAACAAGAAGCCGATTAAGTGCAGAAAGTGCAATGAGCATTTCGTGAAATATGGGCCTTTCATGAAGCACATGAAGTCGGTCCACAAGTCCACTCAAAAGATGCATTACAGGGCGATTGTAAAAGCTGAGCCTTGTGTAGTCTGTGGTGAGGACTTCCCCAATCTGCACAACCACTACCGAGCGCATTTGCAGAACCAATGCCAGAACTGCAAGAAATACTTCACATCTTCCAAACTGTTCTCGCGGCATCAGTGTGACGTGGAAGACGCTGATCCTTCGAAAGTGTTCACGTGCGATGAGAATCTCCTAATCCTTATTAACACATACGTTCCTAAAGATGAGAAGGACGACGAAAAATACTATGGCCATGAAGACCAAGAGGACGAAGATGTCCAAGTAGAAGAGAGGGAATATATAAATTCGAGTGATATAAAGATGATAGTTGAAAGCGAGGAGAGTCAGGAGGCGCCAACAGTGCAACCGGATCCTGACGAGAGAAGTCTCCACCTCATGGCGCAGTCTCCGATCATATCGGACGTTCTCTCACTCTATCAGAACCAACAGAAGCAAGACGATGATGATGTGGTCCTTCTAACGGATGATTCTATGGATATTGATATCAGTATTCCTGTTATAACTATTGATTAA
- Protein Sequence
- MALKLGKCRLCLKLGDFYSIFTVDNALQLAEMVMECTRVKVYEGDGLPDKICTECVQKLSSAYIFKQQCERADQELRRNYVPPPGFSITPPPPNRQSSDSAFSTHTDTSNQLSKPSSSADQTPINNRKRSRSRSADAASVGSRTQDLPAKRVQELKNSHKKRPRVDSPNTSYADSDYEYDNSASQFSMETDDSDEPLLKGDGPYKCSKCDKVFTKLRSRASHMRIHTREALGQDAVVDIPRDEDYLEDAVDDEDKLSCEKCDKTFKLKIMLKRHMSTCTGKPAPPTVSPQKELLISLQPIDQVPVGKLVCDICTARFKTLDGLRKHMRVIHAAVPKLDTIVVPRAPVAIPCMFCRKVFDDYFVHTEHFHKCPEKRPVSGYECPMCEKSISRIQNYLSHLRCIHFDLKPPSARASLEATEFQCRVCAQRLGSQDALVTHLAAHMSNMDDQGDDSRASTADGGVSDTSYHSYMPHGPNKCPYCVKSFSYKKGLENHIAKVHSNAELPLEVKVEVPPDKNPSTSLLTEKYAETESESSQDEAEDLTCDICEKMFSYKRLLLQHKRTKHNMSSGHKRAKINLKDCSVRCLICDVEMKVSAVNEHNQKHITANIKPRNLYTCAQCGEKFKACSGLANHIKLIHRLKQVPKPKVPKLQGGSELADFCEVVVTKTEPLDDIQSHNGLEVPSSAAPLINLSGFTCPICGKTLATLISLKRHVNWHSNVGNNIESKVECFVCKETFRFKRHYKLHMSMHYKDPNIDPKHLTCSICNRKSKHLRAALAHMNFHKQTRFQNKDYQCSICKRVFQYRKVYLSHMAIHYKRGESIQNTVVGDILPENADKSAFDGSHTCHLCGKVCDSETSLKCHVSWHKSKTSLFGNRHECHICQVQFTNKRRLEYHIREHYEDENGPYKCTICGKGYIDEEYYKRHVKGHNFDHQCHKKRIEKLRKDKVKCPICTRFYPDLLHLIRHIKRTHPESKMIKNDPDAPPPMYYSCKLCAKVFMDQRRLQSHEEAHLRKPEFFKCKFCGKKTISLKSHRIHIKGHLTTKFLDNPLKCTQCDDMFIKGYDLHHHLRDVHNIEETWIADRNEQALTGPLKDLQCSVCLKILASKGNYERHLDYHNSLRCNYCFDYFSSLRFLEGHLAFSCDKKKLIGDTEPHPRKIKCHVCYKAFHLQVKLDCHLRTQHGIKVNKEASSERKDTVCDYCFKVFENEDCLISHKTYHRTFGYFGCIYCNRKFNTMTLYRKHKNHHFSQLNVDNPTKCEHCDETFVAFREMISHMKEVHGDDKEWVTMPKEVIEEECPICKKIFFNLHRHLDYHEENKCKKCGEYFFSRTDYDNHLCSIESDDETAERCDGSLESKYQECGFCFKPITRVSSELKHVKIHRGSGSISCRFCPHKFKTMDAFNIHAFSHRSRKYNKKPIKCRKCNEHFVKYGPFMKHMKSVHKSTQKMHYRAIVKAEPCVVCGEDFPNLHNHYRAHLQNQCQNCKKYFTSSKLFSRHQCDVEDADPSKVFTCDENLLILINTYVPKDEKDDEKYYGHEDQEDEDVQVEEREYINSSDIKMIVESEESQEAPTVQPDPDERSLHLMAQSPIISDVLSLYQNQQKQDDDDVVLLTDDSMDIDISIPVITID*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00012238;
- 90% Identity
- iTF_01220836;
- 80% Identity
- -