Epin007079.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Euzophera pinguis
Gene Symbol
-
Assembly
GCA_947363495.1
Location
OX376157.1:3532343-3542649[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 28 0.00017 0.013 16.5 0.8 1 23 207 229 207 229 0.99
2 28 0.00011 0.0088 17.1 0.5 2 22 260 280 259 280 0.93
3 28 6.7e-06 0.00052 20.9 0.4 3 23 315 336 313 336 0.96
4 28 0.00092 0.072 14.2 0.1 1 23 385 408 385 408 0.96
5 28 0.0026 0.21 12.8 0.1 1 23 425 447 425 447 0.98
6 28 4.9e-05 0.0039 18.2 0.3 2 23 484 506 483 506 0.97
7 28 8.9e-05 0.007 17.4 1.8 2 23 550 572 549 572 0.97
8 28 0.00072 0.056 14.5 0.5 1 23 622 645 622 645 0.97
9 28 0.00066 0.052 14.6 0.2 1 23 702 724 702 724 0.97
10 28 0.018 1.4 10.1 6.4 2 23 736 757 735 757 0.97
11 28 0.09 7.1 7.9 1.8 2 23 769 790 768 790 0.96
12 28 0.0036 0.28 12.3 1.0 1 23 800 822 800 822 0.98
13 28 2.2 1.7e+02 3.6 6.8 1 23 851 873 851 873 0.91
14 28 0.0037 0.29 12.3 4.2 1 23 884 906 884 906 0.97
15 28 3.5e-05 0.0027 18.6 0.5 1 23 914 936 914 936 0.98
16 28 0.00054 0.042 14.9 0.8 2 23 956 978 955 978 0.97
17 28 0.11 8.2 7.7 0.8 1 23 996 1018 996 1018 0.97
18 28 1.5 1.2e+02 4.1 3.6 1 23 1025 1047 1025 1047 0.93
19 28 0.016 1.3 10.3 2.9 2 23 1058 1080 1057 1080 0.95
20 28 0.025 1.9 9.7 0.2 2 23 1103 1124 1102 1124 0.95
21 28 0.0093 0.73 11.0 3.4 1 23 1204 1226 1204 1226 0.96
22 28 4.2 3.3e+02 2.7 5.6 5 23 1236 1254 1234 1254 0.94
23 28 0.012 0.94 10.7 0.9 2 23 1265 1287 1264 1287 0.95
24 28 0.97 76 4.7 2.3 2 23 1304 1322 1304 1322 0.88
25 28 0.28 22 6.4 3.0 2 21 1326 1345 1325 1346 0.94
26 28 0.33 26 6.1 1.8 2 23 1395 1416 1394 1416 0.94
27 28 0.013 1 10.6 2.2 2 23 1427 1449 1426 1449 0.97
28 28 0.049 3.8 8.8 4.4 2 21 1487 1506 1486 1507 0.95

Sequence Information

Coding Sequence
ATGGCTCTCAAATTGGGAAAATGCAGGCTCTGCCTGAAGCTGGGCGACTTTTACTCGATCTTCACCGTGGACAATGCCCTACAGCTGGCAGAGATGGTGATGGATTGCACGCGAGTTAAGGTGTATGAAGGTGATGGACTGCCAGACAAAATCTGCACGGAGTGTGTGCAGAAGTTGAGCAGTGCTTACATATTTAAGCAGCAATGTGAGAGGGCTGATCAGGAGTTGAGGAGGAACTATGTTCCACCACCAGGTTTCAGCATTACCCCACCACCTCCAAACAGACAGAGCAGTGACTCTGCTTTCTCGACACACACTGACACTTCCAATCAGCTGTCCAAGCCCTCATCTTCCACCGACATCCAGACCCCAAACAACAGGAATCGAAAGCGAAGTAGGAGTCGCAGCGTCGACGCCGCGTCCGTGGGCTCGCGGTCGCAAGACATTCCAGGAAACACCAAGCGAGTTCAAGAACTCAAAAATTCACACAAAAAGAGACCAAGGGTGGAGTCTCCGAACACGTCTTACGCCGATTCCGACTATGAATATGACAACAGTGGATCGCAATTCTCTATGGAGACGGACTCGGATGAACCACTGCTCAAGGGCGACGGCCATTACAAATGCACGAAATGCGACAAGGTGTTCGCGAAAATACGCAGCCGCGCGATACACATGCGTATTCATACGAGAGAAGCTTTAGGACAAGACGCCGTCGTTGACATACCTCGAGAGGTAGACTACGAGCAGGACGCGAATGATGCCGAGGACAAGTTGAGTTGCGAGAAATGTGACAAAACATTCAAGCTGAAAATCATGCTGAAGCGGCACATGGCGACCTGCACCGGCAAGCAGCCATCGCCGCCTCAAGTTTCCCTTCAAAAAGAGCTGCTGATATCGCTCCAGCCGATAGACCAAGTGCCCGGGGTCGGAAAACTCGACTGCGACATTTGCACGGCTAAATTCAAAACGCTGGATAATCTCCGGAAGCACATGCGAGTGATACACGCCGCGGTGCCGAAGATCGATACGATAGTGCTTCCGAAAGAGCCAGTAGCGATCCCGTGCTTGTTCTGCAAGCAGATCTTCGACAACTTCAACTCGCACGTGGAGCATTTCAACAAATGCCCGGACAAGAAGCCCGTCACTAGTTACGAGTGTCCCATGTGCGATAAGGTCATATCGAGGGTGCAGAATTATTTGAGTCATTTGCGGGGAATGCATTTTGAGGTGAAGCTATCGAATCGATTGGAGGGGAGTTCAGCGGAGGGTTTCCAATGCCGCGTGTGCAGCAGGAGGCTGCCGTCGCAGGACCTTCTGGTGGCACACCTCGCCACGCACATGTCCAACATGGAGGGAGGGGATCTCGATGATGACTCCAGGGCCAGCACAGCTGACGACATGATCTCGGACACCAGCTACTCTGGCTACATGCCATACGGCCCTAACAAGTGTCCCTACTGTGTCAAATCCTTTGCATACAAAAAGGGTCTCGAAACTCACATAATGAAAGCACATCCCGACCCACCAGAATTACCTTTAGAAGTCAAAGTTGAAGTTCCCGCAGATAAGAACCCATCAACTAGTCTGTTAACGGAGAAATACGCAAGCGATTCGGAGTCTAGTCAAGAAGAGGCGGAGGACCTAACTTGTGATATATGCGAGAAAATGTTCTCGTACAAACGTTTGTTGCTACAGCACAAACGCACCAAACACAACATGAGTTCGGGTCACAAGCGAGCGAAGATCAACCTTAAAGATTGTTCTGTGCGTTGTCTCATTTGCGACATTGAGATGAAAGTTAGTGCCGTTAATGAGCACAATCAGAAGCATATAACGGCTAATATTAAACCGAGGAATTTGTATACGTGTGCGCAGTGCGGGGAGAAGTTCAAAGCGTGTAGTGGTCTTGCGAATCACATCAAGCTGATCCATCGGTTGAAGCAGGTGCCGAAGCCGAAGGTGCCGAAGTTGCAGGGCGGCTCGGAGCTCGCGGATTTTTGTGAAGTCGTTGTGACGAAGACGGAGCCCCTGGACGACATCCAGAGTCACAACGGCTTGGAGGTTCCGTCGGAAACGGCGCCGCACGTTAACCTTAGCGGGTTCACGTGCCCAATCTGCAGCAAGACGCTCGGCACGCTCATCTCGCTCAAACGACACGTCAACTGGCATTCCAACGTCGGCAACAACATCGAGACTAAGCTGGAGTGCTTCGTTTGTAAAGAGACATTCCGTTTCAAATGCCACTACAAGTTGCACATGAAGGTGCACTACAAGGACACCAACATCGACCCCAAGCACCTCACGTGTTCCATCTGCAACCGCAAGAGCAAGCATCTCCGGGCAGCGCAGGCCCACATGAACTTTCACAAGCAAACCCGCTTCCAGAACAAGGACTACCAATGCTCCATCTGCAAACGAGTGTTCCAGTACAGGAAAGTATACCTTTCACACATGGCCATACACTACAAGCGAGGAGACAGCAGTCAGAACACTATTGTCGGTGATATCTTACCAGAAAATGCTGATAAGACTGCCTTCGATGGAAGCCACACGTGCCATCTATGCGGTAAGGTTTGCGATTCAGAAAATTCTCTCAAATGCCATGTCTCCTGGCACAAGTCTAAAACTTCGCTGTTTGGGAACAGACATGAATGCCATATATGCCAGGTACAGTTCACTAATAAAAGAAGGTTGGAGTATCACATTAGGGAACATTATGAAGATGAGAACGGTCCATACAAATGTACTATCTGCGGGAAAGGCTACATTGATGAGGAGTATTTTAAACGGCACGTCAAAGGCCACAATTTTGACCACCAATGTCACAAAAAGCGGATTGAGAAATTGCGGAAAAACAAAGTTAAGTGTCCAATTTGTACGCGGTTTTACCCAGATTTACTACATTTGATTCGGCACATCAAGCGGACGCATCCTGAGAGCAAGATGATTAAAACTGATCCCGACGCGCCGCCGCCGATGTATTACTCTTGCAAGTTGTGTGCCAAAGTGTTCCTCGACCAGCGCAGGCTACAGAACCACGAGGAAAGGCACTTGAGGAAGCCAGAGTTCTTCAAGTGCAAATTCTGTGGAAAGAATACTATGTCACTGAAAAGCCACAGGATTCACATCAAGGGACATTTGACCACGAAATTCTTGGACAATCCGCTCAAATGCACTCAGTGTGACGAGATGTTCATAAAGGGATACGACTTGCACCATCATCTGCGTGACACACACAACATCAACGAGACTTGGATCGCGGACCGCAACGAGCAGGCACTGACAGGCCCGCTGAAGGACTTGCAGTGTTCCGTGTGTCTCAAAATATTAGCCAGCAAAGGCAACTACGAACGGCACCTCGACTATCACAACTCTCTCAGGTGCAACTATTGCTTCGACTACTTTAGCACGCTGAGGTTCCTGGAGGGACATTTGGCATTTAGCTGCGACAAGAAGAAGCTGATCGGCGACACGGAACCACATGCGAGGAAAATCAAATGCCACGTTTGCTATAAAGCCTTCCATCTGCAAGTCAAGTTAGACTGTCATTTGCGAACGCAGCACGATATCAAAGTGAATAAAGAAGCATCTTCCGATAGAAAAGATTTCGTCTGCGATTATTGTTTCAAAGTGTTCGAAAACGAGTATTGTTTGAGCACGCACAAGATCTACCACCGGACCATCGGATACTTTGGCTGTATCTACTGCAATAGGAAGTTTAACACGATGACAACGTACCGGAAACATAAGAATCATCATTTTTCGCAACTGAATGTTGACAACCCCACTAAGTGTGAACATTGTGACGAGACCTTTGTCGCCTTCCGCGAGATGATCAGCCACATGAAGGAGGACCATGGCGACGATAAGGAGTGGGTGGTCCTGCCCAAGGAGGCCATTGAAGAAGAATGCCCAATTTGTAAGAAAATTTTCTTCAATCTTCATAGGCACTTGGATTATCACGAGGAAAATAAATGCAAGAAATGCGGAGAGTACTTCTTCTCACGAACAGACTTTGATAATCACTTGTGTAGTATTGAGAGCGACGACGAAACCGCTGAGAGATTCGACGGCAGTTTGGAGTCCAAGTACCAGGAGTGCAACTTCTGTTTCAAGCCAATAACTAGAGTGAGCTCGGAACTGAAACACGTTAAGATTCACAGAGGCTCGGGATCAATATCTTGTCGATTCTGCCCACACAAGTTCAAAACGATGGACGCGTTCAACATCCACGCGTTCTCTCACAGGAGTAGGAAATATAACAAGAAGCCGATAAAGTGCAGGCAATGCAATGAGCATTTTGTCAAGTACGGGCCATTTATGAAGCACATGAAGACGGTGCATAAGTCCACTCAGAAGATGCACTACCGCGCCATCGTGAAGGCGGAACCGTGCGTCGTTTGCGGCGGAGACTTCCCCAATCTGCACAACCATTATCGCGCTCACTTACAGAACCAATGCCAGAATTGTAAAAAGTATTTCACGTCTTCAAAGCTATTCTCGCGACACCAATGCGACGTCGATGACGCGGATCCTTCGAAAGTGTTCACTTGCGACGAGAATCTCCTAGTCCTTATAAATACATATGTTCCTAAAGATGAGAAAGACGACGAAAAATACTACGGCCATGACGATCCGGAAGGAGAGGATCAGGTCGAAGAAGAGTCGGAAGAAGTGAGAGAGTATATTAACGCGGGGGATATAAAGACTATGGTCGAGAGCCAGGACGAGGAAAGCCAAGAGGCGGTAGCGACGCCCGACCCTGACGAGAGGAGCTTGCACCTGATGGCGCAGTCGCCGATCATATCGGACGTGCTGTCCCTCTATCAGAACCAACAGAAGGCGCAGGAAGATGACGACGTCGTCCATCTCACTGACGACGACTCGATGGACATTGACATCAGTATTCCGGTTATAACGATCGATTAA
Protein Sequence
MALKLGKCRLCLKLGDFYSIFTVDNALQLAEMVMDCTRVKVYEGDGLPDKICTECVQKLSSAYIFKQQCERADQELRRNYVPPPGFSITPPPPNRQSSDSAFSTHTDTSNQLSKPSSSTDIQTPNNRNRKRSRSRSVDAASVGSRSQDIPGNTKRVQELKNSHKKRPRVESPNTSYADSDYEYDNSGSQFSMETDSDEPLLKGDGHYKCTKCDKVFAKIRSRAIHMRIHTREALGQDAVVDIPREVDYEQDANDAEDKLSCEKCDKTFKLKIMLKRHMATCTGKQPSPPQVSLQKELLISLQPIDQVPGVGKLDCDICTAKFKTLDNLRKHMRVIHAAVPKIDTIVLPKEPVAIPCLFCKQIFDNFNSHVEHFNKCPDKKPVTSYECPMCDKVISRVQNYLSHLRGMHFEVKLSNRLEGSSAEGFQCRVCSRRLPSQDLLVAHLATHMSNMEGGDLDDDSRASTADDMISDTSYSGYMPYGPNKCPYCVKSFAYKKGLETHIMKAHPDPPELPLEVKVEVPADKNPSTSLLTEKYASDSESSQEEAEDLTCDICEKMFSYKRLLLQHKRTKHNMSSGHKRAKINLKDCSVRCLICDIEMKVSAVNEHNQKHITANIKPRNLYTCAQCGEKFKACSGLANHIKLIHRLKQVPKPKVPKLQGGSELADFCEVVVTKTEPLDDIQSHNGLEVPSETAPHVNLSGFTCPICSKTLGTLISLKRHVNWHSNVGNNIETKLECFVCKETFRFKCHYKLHMKVHYKDTNIDPKHLTCSICNRKSKHLRAAQAHMNFHKQTRFQNKDYQCSICKRVFQYRKVYLSHMAIHYKRGDSSQNTIVGDILPENADKTAFDGSHTCHLCGKVCDSENSLKCHVSWHKSKTSLFGNRHECHICQVQFTNKRRLEYHIREHYEDENGPYKCTICGKGYIDEEYFKRHVKGHNFDHQCHKKRIEKLRKNKVKCPICTRFYPDLLHLIRHIKRTHPESKMIKTDPDAPPPMYYSCKLCAKVFLDQRRLQNHEERHLRKPEFFKCKFCGKNTMSLKSHRIHIKGHLTTKFLDNPLKCTQCDEMFIKGYDLHHHLRDTHNINETWIADRNEQALTGPLKDLQCSVCLKILASKGNYERHLDYHNSLRCNYCFDYFSTLRFLEGHLAFSCDKKKLIGDTEPHARKIKCHVCYKAFHLQVKLDCHLRTQHDIKVNKEASSDRKDFVCDYCFKVFENEYCLSTHKIYHRTIGYFGCIYCNRKFNTMTTYRKHKNHHFSQLNVDNPTKCEHCDETFVAFREMISHMKEDHGDDKEWVVLPKEAIEEECPICKKIFFNLHRHLDYHEENKCKKCGEYFFSRTDFDNHLCSIESDDETAERFDGSLESKYQECNFCFKPITRVSSELKHVKIHRGSGSISCRFCPHKFKTMDAFNIHAFSHRSRKYNKKPIKCRQCNEHFVKYGPFMKHMKTVHKSTQKMHYRAIVKAEPCVVCGGDFPNLHNHYRAHLQNQCQNCKKYFTSSKLFSRHQCDVDDADPSKVFTCDENLLVLINTYVPKDEKDDEKYYGHDDPEGEDQVEEESEEVREYINAGDIKTMVESQDEESQEAVATPDPDERSLHLMAQSPIISDVLSLYQNQQKAQEDDDVVHLTDDDSMDIDISIPVITID

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00012238;
90% Identity
-
80% Identity
-