Ztar005853.1
Basic Information
- Insect
- Zaprionus taronus
- Gene Symbol
- Hr39
- Assembly
- GCA_018901805.1
- Location
- JAEIFH010001450.1:2025587-2029506[+]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.23 1.9e+03 -2.2 2.5 149 172 35 56 5 106 0.42 2 5 2 1.7e+04 -9.9 11.7 127 127 193 193 37 258 0.43 3 5 0.14 1.2e+03 -1.4 2.3 52 113 198 259 181 297 0.77 4 5 1.2e-09 1.1e-05 25.0 0.0 1 27 390 416 390 435 0.85 5 5 2.7e-84 2.3e-80 271.0 0.7 93 408 436 717 415 717 0.87
Sequence Information
- Coding Sequence
- ATGCCCAACATGTCTAGCATCAAGACGGAGCAGGGCGTCTCCCCTGGCGGCAGCAGCAGCAGCGGCGGCAGTTACCACCAGTTGCCGGTGAACATGTCCAGCACGATGACCTCGACCTCGAGCAGCTCCACGACCACAAGCCGTCACAATGTGTCCGTGACGAACATCAAGTGCGAGCTGGAGGATCAATTGCCGCAGACGCCCAATGGGAATCATCTGGTGCCTGTGATAGCCAGCTACGCGACGCATCCCCACAACAATCACAGCAGCAGCAGCAATCACATCAATCACAACAATCACAGCAGCAGCCTGCGCATACCACTAGGCGGGGGCGGGGGTGGGCAGGAGGATGATGAGGAGTCCGACTCAGACGCGGAGCTGGCGAATATTGAGAATCAAAAGAACTATTCGAACAGCAAACTGAAGCTGGCGCCCACGCAAAGTGATCCCATCAATCTGAAGTATGAACCCGCTGTCGGCGTCGGCGTTTGCGATCGCAGCAAATCCTCAAGCGGTGGCCACCTGCCACTGTTGCCCGCCAATCCGAGTCCCGATTCTGCCATACATTCCGTCTACACGCACAGCAGCCCATCGCAGTCGCCGCTGACGTCACGCCACGCCCCCTACACACCGTCGCTGAGTCGCAACAACAGCGACGCATCGCACAGCAGCTGCTACAGCTATAGCTCTGAGTTCAGTCCCACCCACTCACCCATTCAGGCACGTCATGCTCCACCCGCCGGTTCAGCGCTGTTTCCTGGCGCCAGCGCAGCCGGCAATGGTTTGCTCTACAGGCCGCTCAATGTAGATGCTGCTGCGGCGCAGGAGGCACAAAATCTCAGCATGGATGGTAGCGGTGTAGGTGCAGGTGCAGGTGCAGGCTCCACGCAACTGGATGCCACAGCTGCGCTGCCTGCCTCGCCGGCGGGCATCTCACGGCAACAGCTCATCAATTCCCCGTGCCCCATTTGTGGTGATAAGATCAGTGGCTTCCATTACGGCATCTTCTCGTGCGAATCGTGCAAGGGCTTCTTCAAGCGCACCGTACAGAATCGCAAGAACTATGTGTGCGTACGCGGAGGTCCCTGTCAGGTGAGCATCTCCACGCGCAAGAAGTGTCCCGCCTGCCGCTTCGAGAAGTGCCTGCAGAAGGGCATGAAACTGGAGGCCATACGAGAGGATCGCACACGTGGCGGTCGTTCCACCTATCAATGCTCCTACACGTTGCCCAATTCGATGCTCACGAGTCCCAGTCTGGGTGCATCCATCAAAACGGAGCAGACAGAGCCGCTAAATCATCACGCGTCGCGTGCCTCAAGCATTCCAGCCCTGCTGCAGGAAATCATGGATGTTGAACATCTTTGGCAATACACAGATGCGGAACTGGCGCGCATCAATCAACCTTTGTCCTCATTTGCCAGCGGCGGCGGCGGCGGCGGCTCCACGTCGGGCTCTACGGCGGGCAATGCAACGGGTGGGGGTGGCACAGCTGGTGCCAGTGCGCAACAGATGACCAATCCACTGCTGGCCAGTGCGGGTCTCTCATCCAATGGGGAGAATGCCAATCCCGATCTGATTGCCCATCTCTGCAATGTGGCCGATCATCGACTGTACAAGATTGTCAAATGGTGCAAGAGTTTGCCGCTCTTCAAGAACATCTCGATCGACGATCAGATCTGCCTGCTCATTAATTCATGGTGCGAGCTGTTGCTCTTCTCCTGCTGCTTTCGTTCCGTTGACACGCCTGGGGAGATCAAGATGTCGCAGGGTCGAAAGATCACGCTGGCACAAGCCAAAACCAATGGACTGCAGGCCTGCATTGAGCGCATGTTGAATCTGACCGATCATTTGCGACGTTTACGCGTTGATCGGTACGAATATGTTGCCATGAAGGTAATCGTGTTGCTGCAGTCCGACACCACAGAGCTGCACGAGGCGGTCAAGGTGCGCGAGTGCCAGGAGAAGGCGCTGCAGGGACTGCAGGCTTATACGCTGGCACATTATCCCGATACGCCGTCCAAGTTTGGTGAGCTGCTGTTGCGCATACCCGATCTTCAGCGCACGTGTCAGTTGGGCAAGGAAATGTTAACGATCAAGACGCGCGACGGCGCCGACTTCAATTTGCTGATGGAGCTGCTACGCGGAGAACATTGA
- Protein Sequence
- MPNMSSIKTEQGVSPGGSSSSGGSYHQLPVNMSSTMTSTSSSSTTTSRHNVSVTNIKCELEDQLPQTPNGNHLVPVIASYATHPHNNHSSSSNHINHNNHSSSLRIPLGGGGGGQEDDEESDSDAELANIENQKNYSNSKLKLAPTQSDPINLKYEPAVGVGVCDRSKSSSGGHLPLLPANPSPDSAIHSVYTHSSPSQSPLTSRHAPYTPSLSRNNSDASHSSCYSYSSEFSPTHSPIQARHAPPAGSALFPGASAAGNGLLYRPLNVDAAAAQEAQNLSMDGSGVGAGAGAGSTQLDATAALPASPAGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCVRGGPCQVSISTRKKCPACRFEKCLQKGMKLEAIREDRTRGGRSTYQCSYTLPNSMLTSPSLGASIKTEQTEPLNHHASRASSIPALLQEIMDVEHLWQYTDAELARINQPLSSFASGGGGGGSTSGSTAGNATGGGGTAGASAQQMTNPLLASAGLSSNGENANPDLIAHLCNVADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSVDTPGEIKMSQGRKITLAQAKTNGLQACIERMLNLTDHLRRLRVDRYEYVAMKVIVLLQSDTTELHEAVKVRECQEKALQGLQAYTLAHYPDTPSKFGELLLRIPDLQRTCQLGKEMLTIKTRDGADFNLLMELLRGEH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01559808;
- 90% Identity
- iTF_01558344; iTF_01551761; iTF_01551777; iTF_01556883; iTF_01556868; iTF_01559808; iTF_01559791;
- 80% Identity
- iTF_01558344;