Zdav009363.1
Basic Information
- Insect
- Zaprionus davidi
- Gene Symbol
- Hr39
- Assembly
- GCA_018903715.1
- Location
- JAEIGL010000006.1:8977595-8982710[+]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.064 5.2e+02 -0.4 1.7 112 160 43 90 2 141 0.42 2 4 0.04 3.2e+02 0.3 0.6 52 112 213 273 182 328 0.77 3 4 8.8e-11 7.1e-07 28.8 0.0 1 48 400 445 400 451 0.79 4 4 1.5e-84 1.2e-80 271.8 0.7 90 408 447 730 432 730 0.90
Sequence Information
- Coding Sequence
- ATGCCCAACATGTCCAGCATCAAGACGGAGCAGGGCGTCTCCCCTGGCAGCAGCAGCAGCAGCGGCAGTTACCACCAGTTGCCGGTGAACATGTCCAGCACGATGACCTTGACGAGCAGCTCCACGACCACAAGCCGTCACAATGTGTCCGTGACGAACATCAAGTGCGAGCTGGAGGATCAGTTGCCGCAGACGCCCAATGGGAATCATCTGGTGCCTGTGATAGCCAGCTACGCGACGCATCCCCACAACAATCACAGCAGCAGCAATCACATCAATCACAACAATCACAGCAGCAGCAGCCTGCGCATACCGTTGGGCGGGGGCGGTCAGGAGGAGGATGAGGAGTCCGACTCAGACGCGGAGCTGGCAAATATTGAGAATCAAAAGGTGCGCAGACGTGGCACAGATAAGAACGGACCGCGTCCCATGTCCTGGGAGGGTGAACTGAGTGAAACGGAGACGGGGCCGCCGGGGGAGGAGCAGGAGCTGATGGAGACGGAGACGTATGAACCCGCTGTCGGCGTCGGCGTTTGCGATCGCAGCAAATCCTCAAGCGGTGGCCACCTGCCACTGTTGCCCGCCAATCCGAGTCCAGATTCTGCCATACATTCCGTCTACACGCACAGCAGCCCATCGCAGTCGCCACTGACGTCACGCCACGCCCCCTACACACCGTCGCTGAGTCGCAACAACAGCGACGCATCGCACAGCAGCTGCTACAGCTATAGCTCTGAATTCAGTCCCACCCACTCACCCATCCAGGCACGTCATGCTCCACCCGCCGGTTCAGCATTGTTTCCTGGCGCCAGCGCAGCCGGCAATGGTTTGCTCTACAGGCCGCTCAATGTGGATGCAGCGGCGCAGGAGGCGCAAAATCTCAGCATGGATGGTAGCGGTGCAGGTGCAGGCTCCACTCAACTGGATGCCACAGCTGCGCTGCCTGCCTCGCCAGCGGGCATCTCACGGCAACAGCTCATCAATTCACCCTGCCCCATTTGTGGTGATAAGATCAGTGGCTTCCATTACGGCATCTTCTCCTGCGAATCGTGCAAGGGCTTCTTCAAGCGCACCGTACAGAATCGCAAGAACTATGTGTGCGTACGTGGAGGTCCCTGTCAGGTGAGTATCTCCACGCGCAAGAAGTGTCCCGCCTGCCGCTTCGAGAAGTGCCTGCAGAAGGGTATGAAACTGGAGGCCATACGAGAGGATCGCACACGTGGCGGTCGTTCCACCTATCAATGCTCCTACACATTGCCCAATTCGATGCTTAGTCCATTGCTTACGAGTCCCAGTCTGGGTGCATCCATCAAAACGGAGCAGACAGAGCCGCTAAATCATCACTCGTCGCGTGCCTCAAGCATTCCAGCCCTGCTGCAGGAAATCATGGATGTTGAACATCTGTGGCAATACACAGATGCGGAGCTGGCGCGCATCAATCAACCTTTGTCCTCATTTGCCAGCGGCGGCGGCGGCGGCTCCACGTCGGGCTCTACGGCGGGCAATGCAACGGGAGTGGGTGGCACAGCTGGTGCCAGTGCCCAACAGATGACCAATCCACTGCTGGCCAGTGCGGGTCTCTCATCCAATGGGGAGAATGCCAATCCCGATCTGATTGCCCATCTCTGCAACGTGGCCGATCATCGACTGTACAAGATTGTCAAATGGTGCAAGAGTTTGCCGCTCTTCAAGAACATCTCGATCGACGATCAGATCTGCCTGCTCATTAATTCATGGTGCGAGCTGTTGCTCTTCTCCTGCTGCTTTCGTTCCGTTGACACGCCTGGGGAGATCAAGATGTCGCAGGGTCGAAAGATCACGCTGGCACAAGCCAAAACCAATGGACTGCAGGCCTGCATTGAGCGCATGTTGAATCTGACCGATCATTTGCGACGTTTACGCGTTGATCGTTACGAATATGTTGCCATGAAGGTAATCGTGCTGCTGCAGTCTGACACCACAGAGCTGCACGAGGCGGTCAAGGTGCGCGAGTGCCAGGAGAAGGCGCTGCAGGGACTGCAGGCTTATACGCTGGCACATTATCCCGATACGCCGTCCAAGTTTGGTGAGCTGCTGTTGCGCATACCCGATCTTCAGCGCACGTGTCAGTTGGGCAAGGAAATGTTAACGATCAAGACGCGCGACGGCGCCGACTTCAATTTGCTGATGGAACTGCTACGCGGAGAACATTGA
- Protein Sequence
- MPNMSSIKTEQGVSPGSSSSSGSYHQLPVNMSSTMTLTSSSTTTSRHNVSVTNIKCELEDQLPQTPNGNHLVPVIASYATHPHNNHSSSNHINHNNHSSSSLRIPLGGGGQEEDEESDSDAELANIENQKVRRRGTDKNGPRPMSWEGELSETETGPPGEEQELMETETYEPAVGVGVCDRSKSSSGGHLPLLPANPSPDSAIHSVYTHSSPSQSPLTSRHAPYTPSLSRNNSDASHSSCYSYSSEFSPTHSPIQARHAPPAGSALFPGASAAGNGLLYRPLNVDAAAQEAQNLSMDGSGAGAGSTQLDATAALPASPAGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCVRGGPCQVSISTRKKCPACRFEKCLQKGMKLEAIREDRTRGGRSTYQCSYTLPNSMLSPLLTSPSLGASIKTEQTEPLNHHSSRASSIPALLQEIMDVEHLWQYTDAELARINQPLSSFASGGGGGSTSGSTAGNATGVGGTAGASAQQMTNPLLASAGLSSNGENANPDLIAHLCNVADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSVDTPGEIKMSQGRKITLAQAKTNGLQACIERMLNLTDHLRRLRVDRYEYVAMKVIVLLQSDTTELHEAVKVRECQEKALQGLQAYTLAHYPDTPSKFGELLLRIPDLQRTCQLGKEMLTIKTRDGADFNLLMELLRGEH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01559808;
- 90% Identity
- iTF_01558327;
- 80% Identity
- iTF_01551777;