Zdav004981.1
Basic Information
- Insect
- Zaprionus davidi
- Gene Symbol
- -
- Assembly
- GCA_018903715.1
- Location
- JAEIGL010000008.1:4149115-4172566[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 4.6e-12 1e-08 34.5 0.0 1 40 369 409 369 412 0.90 2 4 3.3e-14 7.6e-11 41.4 0.1 2 39 424 461 423 464 0.94 3 4 5.8e-18 1.3e-14 53.4 0.0 1 45 478 523 478 523 0.98 4 4 3.7e-20 8.5e-17 60.4 0.0 1 43 530 573 530 575 0.96
Sequence Information
- Coding Sequence
- ATGGCACGTTTTGAGCAGGAGCAGGAGGAGGAACAGAAGCAGCAGCAGCCTTTTGCTCCTGTTCTCCATGTCTGCTCCATGCCATTCCTCCTGCAGGGTCTGTTACGCACTGCGGAACAATTGAAAATCAAAGGACTCTGCGAGCCGGCTGAGAATGCTGATGATCTGAATGACGCTGCATCTGCGACGATAACCGTGTCGGAGAACATACAGCAGGCAGTGGTTGGCAACATTGTGAACGCGAGTCTTGTGCCCGTTATTCAGGGACAAAATCAAACATCTATCGTGAGTCTACAGCAAACAGCCGACGGCAATTATATACCCGTTACATCTGGCGACGATTCCGATAGCGATAACAAACCGCAAAAGATCTGCAAAACAGAACAATCGGTGGCCTCGCCGGCATCCACATCGTCCACATCGAATAATGCCGCTGCGGGCGTGAGCGGCCAAGCGATTGTGACACAAATTGTAGTAGCGCGCGACGGAAAAGATAATAAAATGACTAGTTTAGGCATGGGCATGAACGGCGGTCTGTTGGGCGTGCCCATGGGCTTTCTGGACTTCACACCGGAACCACCAGCACCATCGGCCACACCAGTTACCGTTACGGAACACGTCGATTTATCGTGCAACCCCAGCACTGATACACGCGATCTATCAAATCCCACCGAACCGCTCGACATAGACAATCATTTGGCTCAGCAAATTCATCGGCTCGATCAATCTCCCATGCACTCGATAGCGCATCATCATACGACCGGAGACGAGAGCAACTCGAATCTGGTGCAGCACATCAAAAGCGAAATCAAACACGAGCCGGGCATGATTATAACGCCAGAGATTGTCAATATGATGTCCACTGGGCATATGGATATGTACAACTCGGATACGAGCGAGGATTCGATGATGATTGCCAACGGTTCGCCGCACGATCAAAATGAACCGCACTATACGAATTTGGATCAGCAACACGGCGGCCTGGGTGGCAGTGTTTGTGGCCCCGGCGCCGGTGGTGTTGGTGGTGGTGGCGGTGGCGGCATTGGTAGTGGTGGTGGTGGTAATGCTGGCGAGAAAGGTCAGTTTAATGGTCCCAAAGCTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAATCAAAACATGAGCCTGACGAAAGCATCTGCCATTTATGGCATACCCTCGACAACATTATGGCAACGTGCACATCGTCTGGGCATCGAAACGCCCAAGAAGGAGGGCGGTACCAAATCATGGAACGAGGATGCCTTGCAGAGTGCACTGGAGGCATTGAGATCGGGCCAGATATCAGCTAATAAAGCATCCAAAGCGTTTGGTATACCCTCATCGACGCTCTACAAGATAGCGCGTCGGGAGGGCATACGGCTGGCGGCGCCATTCAATGCCGCACCAACCACGTGGACACCCGAGGACTTGGAGCGTGCATTGGAGGCGATACGTGCTGGCAATACGTCGGTGCAAAAAGCGAGTGCCGAATTTGGCATACCAACAGGAACACTCTATGGACGCTGCAAACGGGAGGGCATCGAACTTTCACGTTCGAATCCAACACCTTGGTCCGAAGATGCCATGAACGAGGCATTGAACTCAGTGCGCGTTGGCCAGATGTCCATCAATCAGGCGGCCATACACTACAACCTGCCCTACAGTTCGCTCTACGGGCGCTTCAAGCGGGGCAAATACGACGTGGCCAACGTGAGCGGAGTCTCGTTGCTTAACGCTTCGGGCAACACCACCGGCAGCATTGAGATTATTGAACATAGTCAGGAGAATTCGTTGCATATGTTGCAGCAACAGTTCCCGTACAGGCTATCGGGCAGCATTAACTCGGCCAAGTGCAACGACGTCGTTGTGAACGTGCTTTAA
- Protein Sequence
- MARFEQEQEEEQKQQQPFAPVLHVCSMPFLLQGLLRTAEQLKIKGLCEPAENADDLNDAASATITVSENIQQAVVGNIVNASLVPVIQGQNQTSIVSLQQTADGNYIPVTSGDDSDSDNKPQKICKTEQSVASPASTSSTSNNAAAGVSGQAIVTQIVVARDGKDNKMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSIAHHHTTGDESNSNLVQHIKSEIKHEPGMIITPEIVNMMSTGHMDMYNSDTSEDSMMIANGSPHDQNEPHYTNLDQQHGGLGGSVCGPGAGGVGGGGGGGIGSGGGGNAGEKGQFNGPKAWTQDDMNSALDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQSALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVANVSGVSLLNASGNTTGSIEIIEHSQENSLHMLQQQFPYRLSGSINSAKCNDVVVNVL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00587315;
- 90% Identity
- iTF_01559683; iTF_01555335; iTF_01548776; iTF_00587315;
- 80% Identity
- -