Zlac003959.1
Basic Information
- Insect
- Zaprionus lachaisei
- Gene Symbol
- -
- Assembly
- GCA_018901815.1
- Location
- JAEIFI010000592.1:5750995-5768512[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.2e-09 5.1e-06 25.9 0.0 16 40 336 362 332 365 0.84 2 4 3.2e-14 7.3e-11 41.4 0.1 2 39 377 414 376 417 0.94 3 4 5.7e-18 1.3e-14 53.4 0.0 1 45 431 476 431 476 0.98 4 4 3.6e-20 8.3e-17 60.5 0.0 1 43 483 526 483 528 0.96
Sequence Information
- Coding Sequence
- ATGCCTGACAAGGGTCTGTTACGCACTGCGGAACAATTGAAAATCAAAGGACTCTGCGAACCGGCTGAGAATGCTGATGATCTGAATGACGCTGCATCTGCGACGATAACCGTGTCGGAGAACATACAGCAGGCAGTGGTTGGGAACATTGTGAACGCGAGTCTTGTGCCCGTTATTCAGGGACAAAATCAAACATCTATCGTGAGTCTACAGCAAACAGCCGACGGCAATTATATACCCGTTACATCTGGCGACGATTCCGATAGCGATAATAAACCGCAAAAGATCTGCAAAACAGAACAATCGGTGGCCTCGCCGGCATCCACATCGTCCACATCGAATAATGCCGCTGCTGGCGTGAGCGGCCAAGCGATTGTGACACAAATTGTAGTAGCGCGCGACGGAAAAGATAATAAAATGACTAGTTTAGGCATGGGCATGAACGGCGGTCTGTTGGGCGTGCCCATGGGCTTTCTGGACTTCACACCGGAACCACCAGCACCATCGGCCACACCAGTTACCGTAACGGAACACGTCGATTTATCGTGCAACCCCAGCACTGATACACGCGATCTATCAAATCCCACCGAACCGCTCGACATAGACAATCATTTGGCTCAGCAAATTCATCGGCTCGATCAATCTCCCATGCACTCGATAGCGCATCATCATACGACCGGAGACGAGAGCAACTCGAATCTGGTGCAGCACATCAAAAGCGAAATCAAACACGAGCCGGGCATGATTATAACGCCAGAGATTGTCAATATGATGTCCACTGGGCATATGGATATGTACAACTCGGATACGAGCGAGGATTCGATGATGATTGCCAACGGTTCGCCGCACGATCAAAATGAACCGCACTATACGAATTTGGATCAGCAACACGGCGGCTTGGGTGGCAGTGTTTGTGGCCCCGGCGCCGGTGGTGTTGGTGGTGGCGGTGGCGGCATTGGTAGTGGTGGTGGTGGTAATGCTGGCGAGAAAGATGCATTAAAGAATCAAAACATGAGCCTGACGAAAGCATCTGCCATTTATGGCATACCCTCGACAACATTATGGCAACGTGCACATCGTCTGGGCATCGAAACGCCCAAGAAGGAGGGCGGTACCAAATCATGGAATGAGGATGCCTTACAGAGTGCACTGGAGGCATTGAGATCGGGCCAGATATCAGCTAATAAAGCATCCAAAGCGTTTGGTATACCCTCATCGACGCTCTACAAGATAGCGCGTCGGGAGGGCATACGGCTGGCGGCGCCATTCAATGCCGCACCAACCACGTGGACACCCGAGGATTTGGAGCGTGCATTGGAGGCGATACGTGCTGGCAATACGTCGGTGCAAAAAGCGAGTGCCGAATTTGGCATACCAACAGGAACACTCTATGGACGCTGCAAACGGGAGGGCATCGAACTTTCACGTTCGAATCCAACACCTTGGTCCGAAGATGCCATGAACGAGGCATTGAACTCAGTGCGCGTTGGCCAGATGTCCATCAATCAGGCGGCCATACACTACAACCTGCCCTACAGTTCGCTCTACGGGCGCTTCAAGAGGGGCAAATATGATGTGGCCAACGTCAGCGGAGTCTCGTTGCTTAACGCTTCGGGCAACACCACCGGCAGCATTGAGATTATTGAACATAGTCAGGAGAATTCGTTGCATATGTTGCAGCAACAGTTCCCGTACACCTTCTCTCGTTGCCCCACTGTGCAGCCTGTTAAACAGACTCCCGTTGATACTTCAACAGTTGCTCGCTCTGCTCTGCGACCATTTCAGTTTGGACCGGCAACAGCTTCAGGTGGCCGCTTTGCCTCGAGATTTGATGAGGCATTTTGGTTTGATGAGCGCATATGA
- Protein Sequence
- MPDKGLLRTAEQLKIKGLCEPAENADDLNDAASATITVSENIQQAVVGNIVNASLVPVIQGQNQTSIVSLQQTADGNYIPVTSGDDSDSDNKPQKICKTEQSVASPASTSSTSNNAAAGVSGQAIVTQIVVARDGKDNKMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSIAHHHTTGDESNSNLVQHIKSEIKHEPGMIITPEIVNMMSTGHMDMYNSDTSEDSMMIANGSPHDQNEPHYTNLDQQHGGLGGSVCGPGAGGVGGGGGGIGSGGGGNAGEKDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQSALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVANVSGVSLLNASGNTTGSIEIIEHSQENSLHMLQQQFPYTFSRCPTVQPVKQTPVDTSTVARSALRPFQFGPATASGGRFASRFDEAFWFDERI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00587315;
- 90% Identity
- iTF_01551650;
- 80% Identity
- -