Zafr000422.1
Basic Information
- Insect
- Zaprionus africanus
- Gene Symbol
- -
- Assembly
- GCA_018151435.1
- Location
- JAECXB010000118.1:2769327-2781485[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.8e-09 4.8e-06 26.0 0.0 16 40 359 385 355 388 0.84 2 4 2.5e-14 6.8e-11 41.5 0.1 2 39 400 437 399 440 0.94 3 4 4.5e-18 1.2e-14 53.6 0.0 1 45 454 499 454 499 0.98 4 4 2.9e-20 7.6e-17 60.6 0.0 1 43 506 549 506 551 0.96
Sequence Information
- Coding Sequence
- ATGCCAGTTAGCCTGTTACAGTTTGACAATCACTGTGAGGTGAGGCAGGAGGAGCAGCAGAAGCAGGAGCAGAAGCAGCAGCAGCCTTTTGCTCCTGTTCTCCATCTCTGCCCATTCCTTCAGCAGGGTCTGTTACGCACTGCGGAACAATTGAAAATCAAAGGACTCTGCGAGCCGGCTGAGAATGCTGATGATCTGAATGACGCTGCATCGGCGACGATAACCGTGTCGGAGAACATACAGCAGGCAGTGGTTGGCAACATTGGACAAACTCAAACATCTATCGTGAGTCTGCAGCAAACAGCCGACGGCAATTATATACCCGTTACATCGGGCGACGATTCCGATAGCGATAATAAACCGCAAAAGATCTGCAAAACAGAACAATCGGTGGCCTCGCCGGCATCCACATCGTCCACATCGAATAATGCCGCTGCGGGCGTGAGCGGCCAAGCGATTGTGACACAAATTGTAGTAGCGCGCGACGGAAAAGATAATAAAATGACTAGTTTAGGCATGGGCATGAACGGCGGTCTGTTGGGCGTGCCCATGGGCTTTCTGGACTTCACACCGGAACCACCAGCACCATCGGCCACACCAGTTACCGTAACGGAACACGTCGATTTATCGTGCAATCCCAGCACTGATACACGCGATCTATCAAATCCCACCGAACCGCTCGACATAGACAATCATTTGGCTCAGCAAATTCATCGGCTCGATCAATCTCCCATGCACTCGATAGCGCATCATCATACGACCGGAGACGAGAGCAACTCGAATCTGATCAAACACGAGCCGGGCATGATTATAACGCCAGAGATTGTCAATATGATGTCCACTGGGCATATGGATATGTACAACTCGGATACGAGCGAGGATTCGATGATGATTGCCAACGGTTCGCCGCACGATCAAAATGAACCGCACTATACGAATTTGGATCAGCAACACGGCGGCCTGGGTGGCAGTGTTTGTGGCCCCGGCGCCGGTGGTGTTGGTGGTGGTGGTGGCGGTGGCGGCATTGGTAGTGGTGGTGGTGGTAATGCTGGCGAGAAAGATGCATTAAAGAATCAAAACATGAGCCTGACGAAAGCATCTGCCATTTATGGCATACCCTCGACAACATTATGGCAACGTGCACATCGTCTGGGCATCGAAACGCCCAAGAAGGAGGGCGGTACCAAATCATGGAATGAGGATGCCTTGCAGAGTGCACTGGAGGCATTGAGATCGGGTCAGATATCAGCTAATAAAGCATCCAAAGCGTTTGGTATACCCTCATCGACGCTCTACAAGATAGCGCGTCGGGAGGGCATACGGCTGGCGGCGCCATTCAATGCCGCACCAACCACGTGGACACCCGAGGATTTGGAGCGTGCATTGGAGGCGATACGTGCTGGCAATACGTCGGTGCAAAAAGCGAGTGCCGAGTTTGGCATACCAACAGGAACACTCTATGGACGCTGCAAACGGGAGGGCATCGAACTTTCACGTTCGAATCCAACACCTTGGTCTGAAGATGCCATGAACGAGGCATTGAACTCAGTGCGCGTTGGCCAGATGTCCATCAATCAGGCGGCCATACACTATAACCTGCCCTACAGTTCGCTATACGGGCGCTTCAAGCGCGGCAAATACGATGTGGCCAACACCAGCGGAGTCTCGTTGCTTAACGCTTCGGGCAATACCACCGGCAGCATTGAGATTATTGAACATAGTCAGGAGAATTCGGTAGGTTAA
- Protein Sequence
- MPVSLLQFDNHCEVRQEEQQKQEQKQQQPFAPVLHLCPFLQQGLLRTAEQLKIKGLCEPAENADDLNDAASATITVSENIQQAVVGNIGQTQTSIVSLQQTADGNYIPVTSGDDSDSDNKPQKICKTEQSVASPASTSSTSNNAAAGVSGQAIVTQIVVARDGKDNKMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSIAHHHTTGDESNSNLIKHEPGMIITPEIVNMMSTGHMDMYNSDTSEDSMMIANGSPHDQNEPHYTNLDQQHGGLGGSVCGPGAGGVGGGGGGGGIGSGGGGNAGEKDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQSALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVANTSGVSLLNASGNTTGSIEIIEHSQENSVG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00587315;
- 90% Identity
- iTF_01551650;
- 80% Identity
- -