Drel014594.1
Basic Information
- Insect
- Drosophila repletoides
- Gene Symbol
- -
- Assembly
- GCA_018150835.1
- Location
- JAECWQ010000089.1:3113073-3126572[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 4.7e-12 1e-08 34.7 0.0 1 40 324 364 324 367 0.90 2 4 2.6e-14 5.6e-11 41.9 0.1 2 39 379 416 378 419 0.94 3 4 6e-18 1.3e-14 53.6 0.0 1 45 433 478 433 478 0.98 4 4 6.1e-20 1.3e-16 59.9 0.0 1 43 485 528 485 529 0.97
Sequence Information
- Coding Sequence
- ATGAAGGCGGGTCTGCTTCGCACCGCGGAACAATTGAAGATCAAAGGATTGTGTGAGCCGGCTGAGAATGCGGATGATTTAAATGACGCTGCATCGGCGACAATAACCGTATCAGAGAATATACAGCAGGCGGTTGTTGGTAATATTGGACAAAATCAGACATCGATTGTCAGTTTACAGCAGACAGCTGACGGCAATTATATACCGGTGCAATCGGCTGGCGAAGATTCCGATAGCGATAATAAGCCGCAAAAGATTTGCAAAACTGAACAATCGGTTGCCTCCCCAGCGAATTCCACATCGTCCACATCGAATAATGCACCCGGCGTGAGCGGCCAGGCGATTGTAACACAAATTGTAGTAGCGCGCGACGGAAAAGATAAAAATATGACTAGTTTAGGCATGGGCATGAACGGCGGTCTGTTGGGCGTGCCCATGGGATTTCTGGACTTTACACCGGAACCACCAGCACCATCGGCCACTCCAGTCACCGTTACGGAACATGTCGATCTATCGTGCAACCCCAGCACCGATACACGCGATCTATCAAATCCCACCGAACCGCTCGACATAGACAATCATTTGGCTCAGCAAATCCATCGGCTCGATCAATCTCCCATGCACTCGATAGCGCATCATCATGCGACTGGCGACGAGATCATGGAGATTGATCCGAGCCAGATCAAGCACGAGCCAGGCATGATTATAACGCCAGAGATTGTCAATATGATGTCCACTGGACATATGGATATGTATAACTCGGATACGAGCGAGGACTCTATGATGATCGCCAATGGTTCACCGCACGATCAAAATGAACCACACTATACGAATTTGGATCAGCAACACGGCGGTTTGGGGGGCAGCGTTTGTGGCCCTGGCGCCGGCGGTGGTGCTGGTGGTGGCGGCATTGGTGGTGGTGGTAGTAATGCTGGCGAGAAAGGTCAGTTTAATGGTCCCAAAGCTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAATCAAAACATGAGCCTGACGAAAGCATCTGCCATTTATGGCATACCCTCAACGACATTATGGCAACGTGCACATCGTTTGGGAATCGAAACCCCCAAGAAGGAGGGCGGTACTAAATCGTGGAATGAGGATGCATTACAGAATGCCTTGGAGGCATTGCGATCGGGACAAATATCAGCGAATAAAGCATCCAAGGCTTTTGGTATACCCTCGTCGACACTCTACAAGATAGCGCGTCGGGAGGGTATACGGTTGGCGGCGCCATTCAATGCCGCACCAACCACATGGACCCCTGAGGATTTGGAGCGTGCATTGGAGGCGATACGTGCCGGTAATACGTCTGTACAAAAAGCAAGTGCCGAATTTGGCATACCGACAGGAACACTTTATGGACGCTGCAAACGGGAGGGCATCGAACTATCGCGTTCGAATCCAACACCTTGGTCCGAGGATGCGATGAATGAGGCATTGAACTCAGTACGCGTCGGCCAAATGTCCATCAATCAGGCGGCCATACACTACAACCTGCCCTACAGCTCGCTCTATGGGCGCTTCAAGCGAGGCAAATATGATGTGGTGGCCAATACCAGTGGAGTTTCCATTATGAATACCTCGGGAAATACGACCGGAAGCATTGAGATTATCGAGCATAGTCAGGAGAATTCGTTGCATATGTTGCAGCAACAGTTCCCGTACACGCCCATCCGGGGCGGAGAGCTTAAGGCGGCCAAGTTCAAGTGA
- Protein Sequence
- MKAGLLRTAEQLKIKGLCEPAENADDLNDAASATITVSENIQQAVVGNIGQNQTSIVSLQQTADGNYIPVQSAGEDSDSDNKPQKICKTEQSVASPANSTSSTSNNAPGVSGQAIVTQIVVARDGKDKNMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSIAHHHATGDEIMEIDPSQIKHEPGMIITPEIVNMMSTGHMDMYNSDTSEDSMMIANGSPHDQNEPHYTNLDQQHGGLGGSVCGPGAGGGAGGGGIGGGGSNAGEKGQFNGPKAWTQDDMNSALDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVANTSGVSIMNTSGNTTGSIEIIEHSQENSLHMLQQQFPYTPIRGGELKAAKFK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01555335; iTF_01551650; iTF_01559683; iTF_01548776;
- 90% Identity
- iTF_01551650;
- 80% Identity
- -